RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 A0A0G2JLW4 131 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 A0A1W2PR80 420 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 A8MVM7 634 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 LMO7DNF2Z398 122 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM72CH0Y354 149 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SYT7O43581 403 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 TRMUO75648 421 aaKnown RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 GRAP2O75791 330 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CDC123O75794 336 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CEACAM4O75871 244 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CPNE6O95741 557 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PRSS1P07477 247 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PCP11498 1178 aaKnown RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 ANPEPP15144 967 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 UGT1A6P19224 532 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 GJB2P29033 226 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SOX3P41225 446 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CNN1P51911 297 aaKnown RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PHEXP78562 749 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CDH18Q13634 790 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 ITGA9Q13797 1035 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 HERC4Q5GLZ8 1057 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SPANXN4Q5MJ08 99 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM72AQ5TYM5 149 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 TCEAL6Q6IPX3 200 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM72DQ6L9T8 149 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC27A4Q6P1M0 643 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 GET4Q7L5D6 327 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 ADAMTSL2Q86TH1 951 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM72BQ86X60 149 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 DND1Q8IYX4 353 aaKnown RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 LSMEM2Q8N112 164 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SMYD1Q8NB12 490 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CNNM3Q8NE01 707 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 EXOC6Q8TAG9 804 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM76AQ8TAV0 307 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SEPT8Q92599 483 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC35C1Q96A29 364 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 C2orf48Q96LS8 159 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF560Q96MR9 790 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 F2RL3Q96RI0 385 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 S1PR3Q99500 378 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM213AQ9BRX8 229 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 NACAP1Q9BZK3 213 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM49AQ9H0Q0 323 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 SYTL2Q9HCH5 934 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PPANQ9NQ55 473 aaKnown RBP2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 HACD3Q9P035 362 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 DNPEPQ9ULA0 475 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 TCF19Q9Y242 345 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PYGO1Q9Y3Y4 419 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 PLCH2O75038 1416 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 TCOF1Q13428 1488 aaKnown RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF518AQ6AHZ1 1483 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ABCA9Q8IUA7 1624 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 RNF103-CHMP3A0A140T963 221 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 GLTPD2A6NH11 291 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 C15orf61A6NNL5 157 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 PSMD3O43242 534 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TLX2O43763 284 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ECE2O60344 883 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 LRP3O75074 770 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 EPOP01588 193 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CT45A8P0DMV1 189 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CT45A9P0DMV2 189 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 RPL35AP18077 110 aaKnown RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CCNA2P20248 432 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 AADACP22760 399 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 GLRA1P23415 457 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ACKR3P25106 362 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 RABIFP47224 123 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ATXN3P54252 364 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 IRX4P78413 519 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 LCP2Q13094 533 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 SGCGQ13326 291 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CEACAM7Q14002 265 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM132DQ14C87 1099 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 PDK1Q15118 436 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 SPHARQ15513 63 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 MAPK11Q15759 364 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 STX1AQ16623 288 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM106AQ4KMX7 169 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CT45A2Q5DJT8 189 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TOR1AIP1Q5JTV8 583 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TRMT1LQ7Z2T5 733 aaKnown RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CATSPERDQ86XM0 798 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC22A15Q8IZD6 547 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF444Q8N0Y2 327 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TRPV3Q8NET8 790 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM185AQ8NFB2 350 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 C8orf46Q8TAG6 207 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ULK4Q96C45 1275 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 BPIFA2Q96DR5 249 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF300Q96RE9 604 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 PCDHB18PQ96TA0 734 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 NKX3-1Q99801 234 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 OVOL2Q9BRP0 275 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 FUCA2Q9BTY2 467 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 TEX13AQ9BXU3 409 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 C1orf21Q9H246 121 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms