RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ROGDIQ9GZN7 287 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 WDR54Q9H977 334 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 PRDM7Q9NQW5 492 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 ZNF446Q9NWS9 450 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 AHSPQ9NZD4 102 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 FBXW2Q9UKT8 454 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 DSPP15924 2871 aaKnown RBP13.76□□□□□ -0.21
SGCE-204ENST00000428696 ZZEF1O43149 2961 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 IDSB3KWA1 339 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 PLPP1O14494 284 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ONECUT2O95948 504 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 CHEK2O96017 543 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 KLK1P06870 262 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 UMODP07911 640 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 UROSP10746 265 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 RNH1P13489 461 aaKnown RBP13.75□□□□□ -0.21
SGCE-204ENST00000428696 CHN1P15882 459 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ATP5A1P25705 553 aaKnown RBP13.75□□□□□ -0.21
SGCE-204ENST00000428696 HTR6P50406 440 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 STX3Q13277 289 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 CUL3Q13618 768 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ABRAXAS2Q15018 415 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 UGT8Q16880 541 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ADPRMQ3LIE5 342 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 SH2D4BQ5SQS7 431 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ZC3H7AQ8IWR0 971 aaKnown RBP13.75□□□□□ -0.21
SGCE-204ENST00000428696 CA13Q8N1Q1 262 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 EFCAB3Q8N7B9 438 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 FAM47BQ8NA70 645 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 METTL21AQ8WXB1 218 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 SPSB2Q99619 263 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 SLC26A1Q9H2B4 701 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ZNF395Q9H8N7 513 aaPredicted RBP13.75□□□□□ -0.21
SGCE-204ENST00000428696 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 C14orf105Q9NVL8 296 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 MAN2B2Q9Y2E5 1009 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 TRAF6Q9Y4K3 522 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 ZFHX4Q86UP3 3567 aa13.75□□□□□ -0.21
SGCE-204ENST00000428696 CFAP47Q6ZTR5 3102 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 ARGFXA6NJG6 315 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 VSTM2BA6NLU5 285 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 HMGB1P1B2RPK0 211 aaPredicted RBP13.74□□□□□ -0.21
SGCE-204ENST00000428696 H3BQF6 201 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 AZIN1O14977 448 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 LYPLA1O75608 230 aaPredicted RBP13.74□□□□□ -0.21
SGCE-204ENST00000428696 SERPINE1P05121 402 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 FHP07954 510 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
SGCE-204ENST00000428696 WDR4P57081 412 aaKnown RBP13.74□□□□□ -0.21
SGCE-204ENST00000428696 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 CCNYL2Q5T2Q4 361 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 C10orf62Q5T681 223 aaPredicted RBP13.74□□□□□ -0.21
SGCE-204ENST00000428696 DDIASQ8IXT1 998 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 C8orf44Q96CB5 159 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 SH3GL2Q99962 352 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 VPS29Q9UBQ0 182 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 POLHQ9Y253 713 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 TSC22D4Q9Y3Q8 395 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
SGCE-204ENST00000428696 A6NL46 340 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ITM2AO43736 263 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 LINC00032P0C843 101 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CPN2P22792 545 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 JAK1P23458 1154 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 SLC1A6P48664 564 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 LIM2P55344 173 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ABCE1P61221 599 aaKnown RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 BTG2P78543 158 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ACTN3Q08043 901 aaPredicted RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 CHAF1BQ13112 559 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 SLC13A2Q13183 592 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 NSDHLQ15738 373 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 ZNF793Q6ZN11 406 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 THAP4Q8WY91 577 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 EXTL1Q92935 676 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MAPKAP1Q9BPZ7 522 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MESP1Q9BRJ9 268 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 NPLQ9BXD5 320 aaPredicted RBP13.73□□□□□ -0.21
SGCE-204ENST00000428696 FAM117AQ9C073 453 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 TGIF2Q9GZN2 237 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 VN1R1Q9GZP7 353 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PRORYQ9H606 182 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 BRF2Q9HAW0 419 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PTGDR2Q9Y5Y4 395 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 IGLV3-12A0A075B6K2 115 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 MYOCOSA0A1B0GUC4 107 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 CLDN4O14493 209 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 PRMT3O60678 531 aa13.73□□□□□ -0.21
SGCE-204ENST00000428696 IGHEP01854 428 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms