RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SRRQ9GZT4 340 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 RNF167Q9H6Y7 350 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 NDUFB11Q9NX14 153 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 ICKQ9UPZ9 632 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 HS3ST2Q9Y278 367 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 RPL36Q9Y3U8 105 aaKnown RBP14.58□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
C9orf3-204ENST00000424143 CASP8AP2Q9UKL3 1982 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF197O14709 1029 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 SGTAO43765 313 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 TBX19O60806 448 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 POP4O95707 220 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 CATP04040 527 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 ALPPP05187 535 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 PTBP1P26599 531 aaKnown RBP eCLIP14.57□□□□□ -0.086e-8■■■■■ 34.6
C9orf3-204ENST00000424143 OR1D2P34982 312 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 CRATP43155 626 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 RFX2P48378 723 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 POLR2LP62875 67 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 PSPHP78330 225 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 SOWAHCQ53LP3 525 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 MED27Q6P2C8 311 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 KLHL17Q6TDP4 642 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 HTR3DQ70Z44 454 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 NRARPQ7Z6K4 114 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 RNF180Q86T96 592 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 NANOGP1Q8N7R0 232 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 OR9Q1Q8NGQ5 310 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 WDR36Q8NI36 951 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 GRPEL2Q8TAA5 225 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 BTN2A2Q8WVV5 523 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 APOBEC4Q8WW27 367 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 ERLEC1Q96DZ1 483 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 SLC35A5Q9BS91 424 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 TSEN34Q9BSV6 310 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 SLC22A4Q9H015 551 aa14.57□□□□□ -0.08
C9orf3-204ENST00000424143 STOX2Q9P2F5 926 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 LSM7Q9UK45 103 aaKnown RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 CAB39Q9Y376 341 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-204ENST00000424143 ARHGEF33A8MVX0 844 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 FAM25AB3EWG3 89 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 FAM25CB3EWG5 89 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 FAM25GB3EWG6 89 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 E7EQ34 232 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 PCDH17O14917 1159 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 IFNW1P05000 195 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 FURINP09958 794 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 ETFAP13804 333 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 LHCGRP22888 699 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 HLA-DMAP28067 261 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 ACLYP53396 1101 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 SMIM11AP58511 58 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 HBA1P69905 142 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 SEMG2Q02383 582 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 CHRNEQ04844 493 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 RUNX1T1Q06455 604 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 SPHARQ15513 63 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 MED22Q15528 200 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 GLYR1Q49A26 553 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-204ENST00000424143 ARMC4Q5T2S8 1044 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 FAM71E1Q6IPT2 247 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 CD300LDQ6UXZ3 194 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 SLCO4C1Q6ZQN7 724 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 CCDC149Q6ZUS6 474 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 OR6K2Q8NGY2 324 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 NFKBIDQ8NI38 313 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 TRIM63Q969Q1 353 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 RIPOR3Q96MK2 946 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 MTERF1Q99551 399 aaKnown RBP14.56□□□□□ -0.08
C9orf3-204ENST00000424143 TCF25Q9BQ70 676 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 SYT17Q9BSW7 474 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 EFCAB11Q9BUY7 163 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 UCK2Q9BZX2 261 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 ATG10Q9H0Y0 220 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 BRD9Q9H8M2 597 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 RC3H2Q9HBD1 1191 aaKnown RBP14.56□□□□□ -0.08
C9orf3-204ENST00000424143 GULP1Q9UBP9 304 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 REV1Q9UBZ9 1251 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 YIPF1Q9Y548 306 aa14.56□□□□□ -0.08
C9orf3-204ENST00000424143 WASH3PC4AMC7 463 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TLR4O00206 839 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 ETHE1O95571 254 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 DNTTP04053 509 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 HSMCR30P0CW71 290 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SRCP12931 536 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 IL7P13232 177 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SELPP16109 830 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CXCR2P25025 360 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CNR2P34972 360 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 IRS1P35568 1242 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RPS19P39019 145 aaKnown RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 MLLT3P42568 568 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CRISP3P54108 245 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 LMAN2Q12907 356 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TAF12Q16514 161 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 COX20Q5RI15 118 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TIGD3Q6B0B8 471 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RGMBQ6NW40 437 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TMEM150AQ86TG1 271 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms