RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 LGALS13Q9UHV8 139 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 OTOL1A6NHN0 477 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 A8MT66 165 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 TULP2O00295 520 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 PTGIRP43119 386 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 UFM1P61960 85 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 OLIG2Q13516 323 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 PLEKHS1Q5SXH7 462 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 ARSKQ6UWY0 536 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 FITM2Q8N6M3 262 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 SMARCD2Q92925 531 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 ZDHHC2Q9UIJ5 367 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 SLC35F4A4IF30 521 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 IFI30P13284 250 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 S100A2P29034 98 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 GRIA1P42261 906 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 AQP4P55087 323 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 MLLT6P55198 1093 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 DRICH1Q6PGQ1 229 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 TRAPPC6BQ86SZ2 158 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NRROSQ86YC3 692 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NAT8LQ8N9F0 302 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 PXYLP1Q8TE99 480 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 DERL2Q9GZP9 239 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 FBRSL1Q9HCM7 1045 aaKnown RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 OR5K4A6NMS3 321 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 EI24O14681 340 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 HCRTO43612 131 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 ITM2AO43736 263 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 CSTAP01040 98 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 MAPK3P27361 379 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 KIAA0895LQ68EN5 471 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 SLC2A7Q6PXP3 512 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 FTMTQ8N4E7 242 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 LRRC57Q8N9N7 239 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 OR8S1Q8NH09 359 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NSMAFQ92636 917 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 SLC29A3Q9BZD2 475 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 CXorf21Q9HAI6 301 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 TIMM8BQ9Y5J9 83 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-205ENST00000418258 NUP98P52948 1817 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 PLIN4Q96Q06 1357 aa10.82□□□□□ -0.68
PTCH1-205ENST00000418258 LOC100130705A0A1B0GUX0 176 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MANBAO00462 879 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CNTN5O94779 1100 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CD9P21926 228 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 LHCGRP22888 699 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 PLCXD2Q0VAA5 305 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM35AQ53FP2 167 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NLGN4YQ8NFZ3 816 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 THAP6Q8TBB0 222 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 RFT1Q96AA3 541 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TOR3AQ9H497 397 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MAGEE1Q9HCI5 957 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 M0QX08 132 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 AHSGP02765 367 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 IQCF3P0C7M6 154 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 RGS19P49795 217 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MLLT10P55197 1068 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 UBE2NP61088 152 aaKnown RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NPTX1Q15818 432 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TMEM198Q66K66 360 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 KBTBD6Q86V97 674 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 OR6N2Q8NGY6 317 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 FOXJ1Q92949 421 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 NECTIN4Q96NY8 510 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 SSU72Q9NP77 194 aaKnown RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 POMPQ9Y244 141 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 ACOX3O15254 700 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 DIRAS1O95057 198 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 H2BFMP0C1H6 154 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 LMAN2Q12907 356 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 ASB15Q8WXK1 588 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 HERC2P3Q9BVR0 1158 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 C8orf33Q9H7E9 229 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 A0A1W2PQU0 124 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 FEZF1A0PJY2 475 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 UNCXA6NJT0 531 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 J3QRK9 145 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 RFPL2O75678 378 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MRPL3P09001 348 aaKnown RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 HNF1BP35680 557 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 CDH11P55287 796 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 MLLT1Q03111 559 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 HERC3Q15034 1050 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 KCTD9Q7L273 389 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TOMM5Q8N4H5 51 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-205ENST00000418258 DMRTB1Q96MA1 342 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 B4GALT6Q9UBX8 382 aa10.81□□□□□ -0.68
PTCH1-205ENST00000418258 FBXL3Q9UKT7 428 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms