RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CYP2R1Q6VVX0 501 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 BIVMQ86UB2 503 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 AKAP14Q86UN6 197 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 CUZD1Q86UP6 607 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 IL17RCQ8NAC3 791 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 C2orf15Q8WU43 125 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 OR1E3Q8WZA6 343 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 WBP2Q969T9 261 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ISG20Q96AZ6 181 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ROPN1LQ96C74 230 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 CSPG4P5Q96PW8 444 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TRNT1Q96Q11 434 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 AKIP1Q9NQ31 210 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 GKN1Q9NS71 199 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ZDHHC2Q9UIJ5 367 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 CBLCQ9ULV8 474 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 U3KQV3 271 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 COL4A4P53420 1690 aaPredicted RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ATG2AQ2TAZ0 1938 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF840PA6NDX5 716 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 HACD1B0YJ81 288 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TNFSF14O43557 240 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 IGLV3-25P01717 112 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 IRF1P10914 325 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TCEA1P23193 301 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 EEF1B2P24534 225 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 GSTM2P28161 218 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 GRIA3P42263 894 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SERPINB10P48595 397 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 MANFP55145 182 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TPTEP56180 551 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 IRF9Q00978 393 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 FASTKQ14296 549 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 RBM48Q5RL73 367 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 CMC1Q7Z7K0 106 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PELI3Q8N2H9 469 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 C12orf76Q8N812 135 aaPredicted RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 STEAP2Q8NFT2 490 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SNX19Q92543 992 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 C3orf49Q96BT1 292 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 MYEOVQ96EZ4 313 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PPP1R36Q96LQ0 422 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 QKIQ96PU8 341 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SPSB2Q99619 263 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PIP5K1AQ99755 562 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SMOC2Q9H3U7 446 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SP140LQ9H930 580 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SIAEQ9HAT2 523 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TLR8Q9NR97 1041 aaKnown RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SLC17A6Q9P2U8 582 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 DNAJB11Q9UBS4 358 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 VPS51Q9UID3 782 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SLCO3A1Q9UIG8 710 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 FBXW11Q9UKB1 542 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 LHX6Q9UPM6 363 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 MUC3AQ02505 3323 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ILVBLA1L0T0 632 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 MRASO14807 208 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TSPAN4O14817 238 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 COCHO43405 550 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CLEC3AO75596 197 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 GLUD1P00367 558 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 KRT6BP04259 564 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 KRT8P05787 483 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 C2P06681 752 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 GPIP06744 558 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 AGAP20933 346 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CD40P25942 277 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 MGAT1P26572 445 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CCR2P41597 374 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 GRIA1P42261 906 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 KRT6CP48668 564 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CXCR3P49682 368 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 NTHL1P78549 312 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 ZXDBP98169 803 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SMARCB1Q12824 385 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SRSF5Q13243 272 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 BOP1Q14137 746 aaKnown RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 SPCS2Q15005 226 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 BCL7AQ4VC05 210 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FSTL4Q6MZW2 842 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 C8orf82Q6P1X6 216 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 NCEH1Q6PIU2 408 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 KIAA0408Q6ZU52 694 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 GAREM2Q75VX8 874 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 SYT13Q7L8C5 426 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 LINC00523Q86TU6 105 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 PDZD3Q86UT5 571 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 CIR1Q86X95 450 aaPredicted RBP9□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF573Q86YE8 665 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 LACC1Q8IV20 430 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FAM185AQ8N0U4 392 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 FBXL20Q96IG2 436 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 TXNDC15Q96J42 360 aa9□□□□□ -0.97
SNHG3-201ENST00000413987 BTN2A3PQ96KV6 586 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms