RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZFR2Q9UPR6 939 aaKnown RBP16.63■□□□□ 0.25
PHRF1-202ENST00000413872 NFS1Q9Y697 457 aa16.63■□□□□ 0.25
PHRF1-202ENST00000413872 A0A1W2PRG6 482 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 EFCAB9A8MZ26 197 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 GFOD2Q3B7J2 385 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ERMP1Q7Z2K6 904 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ABCB9Q9NP78 766 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ARSDP51689 593 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ARSFP54793 590 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 LRP8Q14114 963 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 GALNT12Q8IXK2 581 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 CCDC116Q8IYX3 515 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 TSACCQ96A04 125 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-202ENST00000413872 BHLHE41Q9C0J9 482 aaPredicted RBP16.62■□□□□ 0.25
PHRF1-202ENST00000413872 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 NKIRAS2Q9NYR9 191 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 RPS15P62841 145 aaKnown RBP16.62■□□□□ 0.25
PHRF1-202ENST00000413872 TNFAIP8L3Q5GJ75 292 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 METTL2BQ6P1Q9 378 aaKnown RBP16.62■□□□□ 0.25
PHRF1-202ENST00000413872 SLC12A9Q9BXP2 914 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF879B4DU55 563 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 WRBO00258 174 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 SDHDO14521 159 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 OR4D2P58180 307 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 E2F2Q14209 437 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 DPPA4Q7L190 304 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 FAM86B1Q8N7N1 296 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 AQP11Q8NBQ7 271 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ZDHHC1Q8WTX9 485 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 GIN1Q9NXP7 522 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 USP3Q9Y6I4 520 aa16.62■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF860A6NHJ4 632 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 GLOD5A6NK44 160 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 KCNJ5P48544 419 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF234Q14588 700 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TPRG1LQ5T0D9 272 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TMIEQ8NEW7 156 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 GPR150Q8NGU9 434 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 FGF13Q92913 245 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 FBXL8Q96CD0 374 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SEC61A2Q9H9S3 476 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TRIM36Q9NQ86 728 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 IL17CQ9P0M4 197 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 KLF15Q9UIH9 416 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 ARL6IP5O75915 188 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 BCKDHAP12694 445 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SLC6A9P48067 706 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 CDKN2DP55273 166 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 MSANTD1Q6ZTZ1 278 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RPS27LQ71UM5 84 aaKnown RBP16.61■□□□□ 0.25
PHRF1-202ENST00000413872 NUP43Q8NFH3 380 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 OR2L5Q8NG80 312 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 GNPDA2Q8TDQ7 276 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TPSD1Q9BZJ3 242 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 FAM25EA8MYX2 175 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SEMA3DO95025 777 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SYNGR4O95473 234 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RAB36O95755 333 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 IFI30P13284 250 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 CKMT2P17540 419 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RBMS1P29558 406 aaKnown RBP16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TSPAN5P62079 268 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 ID2Q02363 134 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TIGD6Q17RP2 521 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 C5orf22Q49AR2 442 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RAB41Q5JT25 222 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 OLFML2AQ68BL7 652 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TSPAN33Q86UF1 283 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TSSK6Q9BXA6 273 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 MBD2Q9UBB5 411 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 PLCL2Q9UPR0 1127 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TPD52L2O43399 206 aaKnown RBP16.61■□□□□ 0.25
PHRF1-202ENST00000413872 GSTM2P28161 218 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 ZNF440Q8IYI8 595 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 C3orf58Q8NDZ4 430 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 OR4C15Q8NGM1 316 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 TMCO6Q96DC7 493 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 RDH12Q96NR8 316 aa16.61■□□□□ 0.25
PHRF1-202ENST00000413872 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 PPM1BO75688 479 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 DIO3P55073 304 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 PER3P56645 1201 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ACY1Q03154 408 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 RPL13AP3Q6NVV1 102 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 FIGLAQ6QHK4 219 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 CEP97Q8IW35 865 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 TMEM74Q96NL1 305 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
PHRF1-202ENST00000413872 ETS2P15036 469 aa16.6■□□□□ 0.25
PHRF1-202ENST00000413872 HK1P19367 917 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms