RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CTNNBL1Q8WYA6 563 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 STARD8Q92502 1023 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ATP6V0A1Q93050 837 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF524Q96C55 264 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 LGALS12Q96DT0 336 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 SIPA1Q96FS4 1042 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRMT6Q96LA8 375 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 MAGEB18Q96M61 343 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 NSMCE3Q96MG7 304 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC3BQ96PB8 259 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PCYT2Q99447 389 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 DDX50Q9BQ39 737 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ECSITQ9BQ95 431 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PSD2Q9BQI7 771 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 BTBD10Q9BSF8 475 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 C16orf70Q9BSU1 422 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 FSD1Q9BTV5 496 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ABHD6Q9BV23 337 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 TDRD1Q9BXT4 1180 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 LRRC2Q9BYS8 371 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 CRNKL1Q9BZJ0 848 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 NACAP1Q9BZK3 213 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 WNT5BQ9H1J7 359 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PSTPIP2Q9H939 334 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PLGRKTQ9HBL7 147 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 HHATLQ9HCP6 504 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 MBNL1Q9NR56 388 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 TCP11L1Q9NUJ3 509 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 INTS9Q9NV88 658 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ATAD3AQ9NVI7 634 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 FGFR1OP2Q9NVK5 253 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 PRMT7Q9NVM4 692 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 GIN1Q9NXP7 522 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 EURLQ9NYK6 297 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 LGALS13Q9UHV8 139 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 CDH7Q9ULB5 785 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 RABL2BQ9UNT1 228 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 ITM2BQ9Y287 266 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 STK38LQ9Y2H1 464 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 HBS1LQ9Y450 684 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 YIPF1Q9Y548 306 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 USH1CQ9Y6N9 552 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 CACNA1FO60840 1977 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 MYO5AQ9Y4I1 1855 aaKnown RBP2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 LAMA4Q16363 1823 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.04
HMGB3P2-201ENST00000411913 CPS1P31327 1500 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 HEG1Q9ULI3 1381 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 FRMPD4Q14CM0 1322 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAP3K19Q56UN5 1328 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAP2P11137 1827 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 A0A0G2JLW4 131 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZCWPW2A0A1B0GU75 182 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 PVALEFA0A1B0GWK0 134 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 A0A1W2PPM1 405 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 OR5K3A6NET4 321 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ANKUB1A6NFN9 424 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 TRIM64CA6NLI5 447 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZNF701M0R085 212 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CAPN9O14815 690 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAPK13O15264 365 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 RGS16O15492 202 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 XRCC3O43542 346 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 IDH3BO43837 385 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 KLRC4O43908 158 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCDC22O60826 627 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 TRMUO75648 421 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 PALMO75781 387 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 SULT1C4O75897 302 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 DCTN3O75935 186 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 PDE5AO76074 875 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLCO2B1O94956 709 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 OR6B1O95007 311 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CELF2O95319 508 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 IL1BP01584 269 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MMP1P03956 469 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 PLEKP08567 350 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 UBTFL6P0CB48 400 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZCCHC18P0CG32 403 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 FAM106CPP0CH98 169 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 HSPD1P10809 573 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 HSPA8P11142 646 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 UQCRBP14927 111 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ACHEP22303 614 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 DNASE1P24855 282 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 HOXC8P31273 242 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 GABRA5P31644 462 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 FOXN2P32314 431 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 COPB2P35606 906 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 LONP1P36776 959 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MTHFRP42898 656 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAGEA1P43355 309 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCR10P46092 362 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 ALDH3B2P48448 385 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 FMO5P49326 533 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 KLK7P49862 253 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CDK9P50750 372 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 BCAP31P51572 246 aa2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 VCPP55072 806 aaKnown RBP2.27□□□□□ -2.05
HMGB3P2-201ENST00000411913 CD81P60033 236 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms