RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CTSLP07711 333 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 IL3P08700 152 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 AMD1P17707 334 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 GRK3P35626 688 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 MVKQ03426 396 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 NPRL3Q12980 569 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 ZXDCQ2QGD7 858 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 OR7G3Q8NG95 312 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 GLYATL1Q969I3 302 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 C12orf66Q96MD2 445 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 TMEM245Q9H330 911 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CUEDC1Q9NWM3 386 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 GABRR3A8MPY1 467 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 SGTAO43765 313 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 PCDHGA12O60330 932 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 ADH5P11766 374 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 TIMP2P16035 220 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 PRPS1L1P21108 318 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 UGT8Q16880 541 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 MACC1Q6ZN28 852 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CCDC103Q8IW40 242 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 OR5D16Q8NGK9 328 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 PHF10Q8WUB8 498 aaKnown RBP12.84□□□□□ -0.35
COL6A2-204ENST00000409416 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 UCN3Q969E3 161 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 CMTM7Q96FZ5 175 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 FEVQ99581 238 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 GPR83Q9NYM4 423 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 SLC13A4Q9UKG4 626 aa12.84□□□□□ -0.35
COL6A2-204ENST00000409416 KCNK5O95279 499 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 RPS3P23396 243 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 SSR2P43308 183 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 MRPL19P49406 292 aaKnown RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CAMK1Q14012 370 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 TIGD6Q17RP2 521 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 GPR33Q49SQ1 333 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 RRM2BQ7LG56 351 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 SHFQ7M4L6 423 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CADM3Q8N126 398 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 KCNS3Q9BQ31 491 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 MAGIXQ9H6Y5 334 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CAB39Q9Y376 341 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CNOT3O75175 753 aaKnown RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 KRT75O95678 551 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 STSP08842 583 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 GADD45AP24522 165 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 S100A5P33763 92 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 NKX3-2P78367 333 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 OLR1P78380 273 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 GSTM4Q03013 218 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 GBX1Q14549 363 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 LYPLAL1Q5VWZ2 237 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 MED27Q6P2C8 311 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 ZZZ3Q8IYH5 903 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 CEP19Q96LK0 163 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 EHD1Q9H4M9 534 aa12.83□□□□□ -0.36
COL6A2-204ENST00000409416 GPC6Q9Y625 555 aaPredicted RBP12.83□□□□□ -0.36
COL6A2-204ENST00000409416 SLC28A2O43868 658 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 C6P13671 934 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CD22P20273 847 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 RYKP34925 604 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TRPC1P48995 793 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 SLC35A2P78381 396 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 GPAT3Q53EU6 434 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TYW3Q6IPR3 259 aaKnown RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 B3GLCTQ6Y288 498 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 PARGQ86W56 976 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CSGALNACT1Q8TDX6 532 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TFGQ92734 400 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 DACT3Q96B18 629 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 BBS4Q96RK4 519 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 MALT1Q9UDY8 824 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 TMPRSS11EQ9UL52 423 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 AP3M1Q9Y2T2 418 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 LAMA1P25391 3075 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 YY2O15391 372 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 SLC16A6O15403 523 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 GABARAPO95166 117 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 EN2P19622 333 aaPredicted RBP12.82□□□□□ -0.36
COL6A2-204ENST00000409416 PPM1AP35813 382 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 LIPAP38571 399 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 MAPK12P53778 367 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 CLDN2P57739 230 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 PRSS36Q5K4E3 855 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
COL6A2-204ENST00000409416 IQCF1Q8N6M8 205 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 549.7 ms