RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 CRB3Q9BUF7 120 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 SLC12A9Q9BXP2 914 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 GLS2Q9UI32 602 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TP73O15350 636 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 CSTAP01040 98 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 F11P03951 625 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 CXorf57Q6NSI4 855 aaKnown RBP13.6□□□□□ -0.23
ITGA6-202ENST00000409080 FBXO42Q6P3S6 717 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 PAMR1Q6UXH9 720 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TMEM174Q8WUU8 243 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 COQ8BQ96D53 544 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TCF7L1Q9HCS4 588 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 CENPMQ9NSP4 180 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 POFUT2Q9Y2G5 429 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 IL3P08700 152 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TIMP2P16035 220 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 FADDQ13158 208 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 DOC2AQ14183 400 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 ARHGAP19Q14CB8 494 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 RINLQ6ZS11 566 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 FAM47BQ8NA70 645 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 MTG2Q9H4K7 406 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 PALMDQ9NP74 551 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TMEM138Q9NPI0 162 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 IL17CQ9P0M4 197 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 HCSTQ9UBK5 93 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 MYH8P13535 1937 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 H0YC42 278 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 M0QX08 132 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 TOR1BO14657 336 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 SMSP52788 366 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 RBPJQ06330 500 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 RCAN2Q14206 197 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 GRIN2CQ14957 1233 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 SYNPOQ8N3V7 929 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 OR56A3Q8NH54 315 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 SH3YL1Q96HL8 342 aaPredicted RBP13.6□□□□□ -0.23
ITGA6-202ENST00000409080 PCDHB16Q9NRJ7 776 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 SPATA2Q9UM82 520 aa13.6□□□□□ -0.23
ITGA6-202ENST00000409080 BLACEA4D250 179 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 FOXO6A8MYZ6 492 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 DGKQP52824 942 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 TRAM2Q15035 370 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 TECRLQ5HYJ1 363 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 LGI4Q8N135 537 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CHST4Q8NCG5 386 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 AGBL5Q8NDL9 886 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SLC39A1Q9NY26 324 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 MYOGP15173 224 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RANBP10Q6VN20 620 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 MYLIPQ8WY64 445 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PKP4Q99569 1192 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RAB26Q9ULW5 256 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CIB4A0PJX0 185 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SCO2O43819 266 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CACNG3O60359 315 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CLDN2P57739 230 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 CLRN1P58418 232 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 BNIP1Q12981 228 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 TUBB3Q13509 450 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 FCRL3Q96P31 734 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 OR6C2Q9NZP2 312 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 ZNF670-ZNF695F2Z2N8 137 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SMAD6O43541 496 aaKnown RBP13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PPM1BO75688 479 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 ARHGEF15O94989 841 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SDC2P34741 201 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 UFM1P61960 85 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PON3Q15166 354 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 SPANXN4Q5MJ08 99 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 FAM69BQ5VUD6 431 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 RAET1LQ5VY80 246 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 GTF2IRD2BQ6EKJ0 949 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 USP30Q70CQ3 517 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 GTF2IRD2Q86UP8 949 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 ZNF100Q8IYN0 542 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 AGAP11Q8TF27 550 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 S100ZQ8WXG8 99 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 PCDHGB2Q9Y5G2 931 aa13.59□□□□□ -0.23
ITGA6-202ENST00000409080 TMEM265A0A087WTH1 108 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms