RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 NME6O75414 186 aaPredicted RBP12.94□□□□□ -0.34
SIRPA-203ENST00000400068 IFNA16P05015 189 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 CCNYL3P0C7X3 344 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 SHMT2P34897 504 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 BTN3A2P78410 334 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 C1DQ13901 141 aaKnown RBP12.94□□□□□ -0.34
SIRPA-203ENST00000400068 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
SIRPA-203ENST00000400068 ALG1LQ6GMV1 187 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 SCAIQ8N9R8 606 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 MYDGFQ969H8 173 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 ZBED6CLQ96FA7 236 aaPredicted RBP12.94□□□□□ -0.34
SIRPA-203ENST00000400068 EPS8L2Q9H6S3 715 aa12.94□□□□□ -0.34
SIRPA-203ENST00000400068 CUEDC1Q9NWM3 386 aaPredicted RBP12.94□□□□□ -0.34
SIRPA-203ENST00000400068 PSMD11O00231 422 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 KPNA4O00629 521 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SCAMP2O15127 329 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 OR10H2O60403 315 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CH25HO95992 272 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 NT5EP21589 574 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 IL12RB1P42701 662 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CLDN2P57739 230 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RPS3AP61247 264 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SLC9A5Q14940 896 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SMN1Q16637 294 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TANGO2Q6ICL3 276 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 NXPE4Q6UWF7 544 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ERI1Q8IV48 349 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 OR4N5Q8IXE1 308 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ZNF689Q96CS4 500 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 DTD2Q96FN9 168 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CITED4Q96RK1 184 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 FEVQ99581 238 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RDH14Q9HBH5 336 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 HMG20AQ9NP66 347 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SOHLH2Q9NX45 425 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 STON1Q9Y6Q2 735 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PIKFYVEQ9Y2I7 2098 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RP1L1Q8IWN7 2480 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ZNF99A8MXY4 864 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CD36P16671 472 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TYRP1P17643 537 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TMEM236Q5W0B7 351 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 EPHX4Q8IUS5 362 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PRSS58Q8IYP2 241 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TSACCQ96A04 125 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RERGQ96A58 199 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ALG14Q96F25 216 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RBCK1Q9BYM8 510 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SLC6A13Q9NSD5 602 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TAS2R9Q9NYW1 312 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TRIOBPQ9H2D6 2365 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 INMTO95050 263 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 TLX1P31314 330 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 GSTM5P46439 218 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RPP38P78345 283 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RGS1Q08116 209 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 KLHL12Q53G59 568 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 NHSL2Q5HYW2 709 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PRR23BQ6ZRT6 265 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 OLIG3Q7RTU3 272 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 DEPDC4Q8N2C3 294 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ZNF548Q8NEK5 533 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 HTRA1Q92743 480 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CHFRQ96EP1 664 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 HSFX1Q9UBD0 423 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SCN4AP35499 1836 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ASPDHA6ND91 283 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 WBP4O75554 376 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 HPGDP15428 266 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 MYL12AP19105 171 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 MYF6P23409 242 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PCSK6P29122 969 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SOX6P35712 828 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 C1orf61Q13536 156 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 CST6Q15828 149 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 ZNF773Q6PK81 442 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 SMARCD3Q6STE5 483 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PLA2G15Q8NCC3 412 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 RGMAQ96B86 450 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 GPATCH1Q9BRR8 931 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 KAT8Q9H7Z6 458 aaKnown RBP12.93□□□□□ -0.34
SIRPA-203ENST00000400068 PPT2Q9UMR5 302 aa12.93□□□□□ -0.34
SIRPA-203ENST00000400068 MIA3Q5JRA6 1907 aa12.92□□□□□ -0.34
SIRPA-203ENST00000400068 ARNTLO00327 626 aa12.92□□□□□ -0.34
SIRPA-203ENST00000400068 C9P02748 559 aa12.92□□□□□ -0.34
SIRPA-203ENST00000400068 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
SIRPA-203ENST00000400068 RGS8P57771 180 aaPredicted RBP12.92□□□□□ -0.34
SIRPA-203ENST00000400068 PFN3P60673 137 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms