RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CCL27Q9Y4X3 112 aa16.39■□□□□ 0.21
PTPRA-205ENST00000399903 A0A075B6Q4 140 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 TRBV5-3A0A0A0MS03 114 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 PCDH17O14917 1159 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 MYL12BO14950 172 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 TAPBPO15533 448 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 KLK8O60259 260 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 CTPS1P17812 591 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 MYL12AP19105 171 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 SDC2P34741 201 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 PRIM2P49643 509 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 LRRC74AQ0VAA2 488 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 PTGES3Q15185 160 aaKnown RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 SPHARQ15513 63 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 FAM151BQ6UXP7 276 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 FAM124AQ86V42 546 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 RDH10Q8IZV5 341 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 ZFP41Q8N8Y5 198 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 OR4M2Q8NGB6 313 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 ZNF431Q8TF32 576 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 QRFPRQ96P65 431 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 TRIM62Q9BVG3 475 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 C1QTNF3Q9BXJ4 246 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 PRDM5Q9NQX1 630 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 NLE1Q9NVX2 485 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 TMCC3Q9ULS5 477 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 ENTPD6O75354 484 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 C1QBP02746 253 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 IGFBP1P08833 259 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 HOXC13P31276 330 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 TAGLNQ01995 201 aaKnown RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 ASAH1Q13510 395 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 DDI2Q5TDH0 399 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 KIAA1841Q6NSI8 718 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 C8orf48Q96LL4 319 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 FAM129BQ96TA1 746 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 BOCQ9BWV1 1114 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 C1QTNF6Q9BXI9 259 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 AP3M1Q9Y2T2 418 aa16.38■□□□□ 0.21
PTPRA-205ENST00000399903 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
PTPRA-205ENST00000399903 PTPRDP23468 1912 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 TRAPPC2P0DI81 140 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 TRAPPC2BP0DI82 140 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SRCP12931 536 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 GLULP15104 373 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 RHOQP17081 205 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 LPOP22079 712 aaPredicted RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 P2RY14Q15391 338 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 LAMTOR1Q6IAA8 161 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SBSNQ6UWP8 590 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 CBLL1Q75N03 491 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 ZNF683Q8IZ20 524 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SIPA1Q96FS4 1042 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 FAM126AQ9BYI3 521 aaPredicted RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 MGAT4AQ9UM21 535 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 RAI2Q9Y5P3 530 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 TRAV6A0A075B6T7 132 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 A0A1B0GVC2 190 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 A6NIN4 97 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SDC1P18827 310 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 NUDT1P36639 197 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SMSP52788 366 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 PTPN5P54829 565 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SRP54P61011 504 aaKnown RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 RPA4Q13156 261 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SUZ12Q15022 739 aaKnown RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 STK11Q15831 433 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 RNASE12Q5GAN4 147 aaKnown RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 COMMD7Q86VX2 200 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 AKAP1Q92667 903 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 CINPQ9BW66 212 aaPredicted RBP16.37■□□□□ 0.21
PTPRA-205ENST00000399903 TPT1P8Q9HAU6 139 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SH3BP4Q9P0V3 963 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 KPNA5O15131 536 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 PRKAR1AP10644 381 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 SEMG2Q02383 582 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 USP30Q70CQ3 517 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 CREB3L2Q70SY1 520 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 AQP11Q8NBQ7 271 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 MAPRE3Q9UPY8 281 aa16.37■□□□□ 0.21
PTPRA-205ENST00000399903 PRAMEF33A0A0G2JMD5 474 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 CBX4O00257 560 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PRAMEF10O60809 474 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 SLC25A14O95258 325 aaPredicted RBP16.36■□□□□ 0.21
PTPRA-205ENST00000399903 TACR2P21452 398 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.36■□□□□ 0.214e-8■■□□□ 14.3
PTPRA-205ENST00000399903 PLAG1Q6DJT9 500 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 MZT2BQ6NZ67 158 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 TRIM69Q86WT6 500 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 PTOV1Q86YD1 416 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 OR52E4Q8NGH9 312 aa16.36■□□□□ 0.21
PTPRA-205ENST00000399903 ZNF296Q8WUU4 475 aaPredicted RBP16.36■□□□□ 0.21
PTPRA-205ENST00000399903 FUBP3Q96I24 572 aaKnown RBP eCLIP16.36■□□□□ 0.212e-19■■■□□ 15.3
PTPRA-205ENST00000399903 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms