RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ERGIC3Q9Y282 383 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 PCDHGA2Q9Y5H1 932 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 KCNJ13O60928 360 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 CCNA2P20248 432 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 IL12AP29459 219 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 FMO3P31513 532 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 MED22Q15528 200 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 TMEM52BQ4KMG9 183 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 SLCO4C1Q6ZQN7 724 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 TECPR1Q7Z6L1 1165 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 ASPGQ86U10 573 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 ANKFN1Q8N957 763 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 OR52E1Q8NGJ3 308 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 NCSTNQ92542 709 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 FGF14Q92915 247 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 INSM2Q96T92 566 aaPredicted RBP13.44□□□□□ -0.26
SCAF4-202ENST00000399804 ARMC1Q9NVT9 282 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 RHCGQ9UBD6 479 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 APOBEC3BQ9UH17 382 aaKnown RBP13.44□□□□□ -0.26
SCAF4-202ENST00000399804 PHF11Q9UIL8 331 aa13.44□□□□□ -0.26
SCAF4-202ENST00000399804 WDR81Q562E7 1941 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 SLC5A10A0PJK1 596 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 KLK8O60259 260 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 BMP2P12643 396 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 TARDBPQ13148 414 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■□□□□ 9.1
SCAF4-202ENST00000399804 KCNAB2Q13303 367 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 C6orf120Q7Z4R8 191 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 SLC30A8Q8IWU4 369 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 NAGSQ8N159 534 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 C1QTNF3Q9BXJ4 246 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 LMAN1LQ9HAT1 526 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 TM9SF3Q9HD45 589 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 LOC100130705A0A1B0GUX0 176 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 TCRBV3S1A0A5B6 114 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GFYI3L273 518 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GTPBP1O00178 669 aaKnown RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 C9P02748 559 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 MATN1P21941 496 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 TNFRSF4P43489 277 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 CTBSQ01459 385 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 MTAPQ13126 283 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 FADDQ13158 208 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GPR68Q15743 365 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GGTA1PQ4G0N0 100 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 FOXB2Q5VYV0 432 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 C2orf74A8MZ97 194 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 H0YIV9 168 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 APOA1P02647 267 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 HRH2P25021 359 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 SOX6P35712 828 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 VSX2P58304 361 aaPredicted RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 SNAPC1Q16533 368 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 OR4C11Q6IEV9 310 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 POLR2J3Q9H1A7 115 aaKnown RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 MBNL1Q9NR56 388 aaKnown RBP13.43□□□□□ -0.26
SCAF4-202ENST00000399804 MED16Q9Y2X0 877 aa13.43□□□□□ -0.26
SCAF4-202ENST00000399804 B4GALT2O60909 372 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 ALPPP05187 535 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 RPL6Q02878 288 aaKnown RBP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 MSANTD1Q6ZTZ1 278 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 FBXO15Q8NCQ5 510 aaPredicted RBP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 STON2Q8WXE9 905 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 TMEM184CQ9NVA4 438 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 GPR89AB7ZAQ6 455 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 ACOT8O14734 319 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 RASAL1O95294 804 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 GPR89BP0CG08 455 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 EIF2DP41214 584 aaKnown RBP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 NR1D2Q14995 579 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 HMGN2P46Q86SG4 172 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 MARVELD2Q8N4S9 558 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 DOK4Q8TEW6 326 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 C11orf16Q9NQ32 467 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 OR5K4A6NMS3 321 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 BTN3A3O00478 584 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 MAGP20916 626 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 XKP51811 444 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 RBBP4Q09028 425 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 MEP1AQ16819 746 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 C11orf91Q3C1V1 193 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 NDUFAF5Q5TEU4 345 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 ADAMTSL4Q6UY14 1074 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 SLC34A3Q8N130 599 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 ELSPBP1Q96BH3 223 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 TOE1Q96GM8 510 aaKnown RBP13.42□□□□□ -0.26
SCAF4-202ENST00000399804 DOHHQ9BU89 302 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms