RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SMURF1Q9HCE7 757 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PCDHB14Q9Y5E9 798 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 H0YAE9 185 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 H3BUI4 141 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 VILLO15195 856 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 JMJD7P0C870 316 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CKMT2P17540 419 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 POU4F2Q12837 409 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SPIN3Q5JUX0 258 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GRHL2Q6ISB3 625 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NANOGP8Q6NSW7 305 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PLEKHG7Q6ZR37 379 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 RNF130Q86XS8 419 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZC3H3Q8IXZ2 948 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 UBE2J2Q8N2K1 259 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SMG8Q8ND04 991 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 DDX1Q92499 740 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 BORCS8Q96FH0 119 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NANOGQ9H9S0 305 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 DLGAP4Q9Y2H0 992 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 C10orf71Q711Q0 1435 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TRIM64A6NGJ6 449 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 OR6C70A6NIJ9 312 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TOR1BO14657 336 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GNB5O14775 395 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FHP07954 510 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 IL3P08700 152 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 BDKRB1P46663 353 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC11A1P49279 550 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 LY6G5CQ5SRR4 150 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC39A4Q6P5W5 647 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 KCTD18Q6PI47 426 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF598Q86UK7 904 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NPLOC4Q8TAT6 608 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ADAMTS18Q8TE60 1221 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 DOHHQ9BU89 302 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM121BQ9BXQ6 578 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ENY2Q9NPA8 101 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SPHK2Q9NRA0 654 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 HRASLS2Q9NWW9 162 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 KLF15Q9UIH9 416 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PRDM4Q9UKN5 801 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 WASF2Q9Y6W5 498 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 A8MU76 341 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC33A1O00400 549 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MANBAO00462 879 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 HSPA12AO43301 675 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 S1PR1P21453 382 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF84P51523 738 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CLCN2P51788 898 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NADK2Q4G0N4 442 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SPANXN4Q5MJ08 99 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SUSD1Q6UWL2 747 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ERN2Q76MJ5 926 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ERMP1Q7Z2K6 904 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GOLM1Q8NBJ4 401 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FANK1Q8TC84 345 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 HS6ST2Q96MM7 605 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NUP50Q9UKX7 468 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SCML1Q9UN30 329 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CRYBG1Q9Y4K1 1723 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 LRP6O75581 1613 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TTC24A2A3L6 582 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TULP2O00295 520 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 B4GALT2O60909 372 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CLEC3AO75596 197 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MPC1LP0DKB6 136 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GDF5P43026 501 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CAPZA1P52907 286 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 COL9A3Q14050 684 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MANEALQ5VSG8 457 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF773Q6PK81 442 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 OR6N1Q8NGY5 312 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 AUTS2Q8WXX7 1259 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM203Q969S6 136 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GAL3ST3Q96A11 431 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC7A6OSQ96CW6 309 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TWNKQ96RR1 684 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SMOQ99835 787 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MAGIXQ9H6Y5 334 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 KCNN3Q9UGI6 736 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 DKKL1Q9UK85 242 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 AJAP1Q9UKB5 411 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PLCL2Q9UPR0 1127 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 C1orf226A1L170 272 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FLRT2O43155 660 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF821O75541 412 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 BPNT1O95861 308 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CSN2P05814 226 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLAMF1Q13291 335 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF829Q3KNS6 432 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 C1orf189Q5VU69 101 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NCEH1Q6PIU2 408 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NAPRTQ6XQN6 538 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMPPEQ6ZT21 453 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 UTS2BQ765I0 119 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF440Q8IYI8 595 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TM9SF2Q99805 663 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GTPBP2Q9BX10 602 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GMEB2Q9UKD1 530 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms