RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 OR8J2Q8NGG1 315 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 OR9A1PQ8NGU1 263 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 NEUROD4Q9HD90 331 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ANKMY1Q9P2S6 941 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PCDHGB6Q9Y5F9 930 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ENPP4Q9Y6X5 453 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 GPX2P18283 190 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 UGT8Q16880 541 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 RSPO2Q6UXX9 243 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CYB5D2Q8WUJ1 264 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 KCTD7Q96MP8 289 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 OR51E2Q9H255 320 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 SMURF1Q9HCE7 757 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZCCHC3Q9NUD5 404 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PLXNA1Q9UIW2 1896 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 GABRR3A8MPY1 467 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 C1QTNF3-AMACRE9PGA6 284 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TBPL1P62380 186 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PTSQ03393 145 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 C5orf22Q49AR2 442 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 UFD1Q92890 307 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 EFHD2Q96C19 240 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TRNT1Q96Q11 434 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 NEK6Q9HC98 313 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TRIM39Q9HCM9 518 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PRDM8Q9NQV8 689 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 KLHL1Q9NR64 748 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ING3Q9NXR8 418 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF624Q9P2J8 865 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PPT2Q9UMR5 302 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 MKI67P46013 3256 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ARHGEF33A8MVX0 844 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 RNASET2O00584 256 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TNFRSF21O75509 655 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PRSS23O95084 383 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CDRT1O95170 752 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CLTBP09497 229 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 NUDT7P0C024 238 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 UQCRC2P22695 453 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.628e-8■■■■□ 20.3
UBE2D3-209ENST00000394804 MEF2AQ02078 507 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 IL18Q14116 193 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 C9orf64Q5T6V5 341 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 COMMD6Q7Z4G1 85 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF614Q8N883 585 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 DNASE1L2Q92874 299 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TMEM203Q969S6 136 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 TRMT2BQ96GJ1 504 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 HRASLS5Q96KN8 279 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CARS2Q9HA77 564 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 CTPS2Q9NRF8 586 aa11.2□□□□□ -0.62
UBE2D3-209ENST00000394804 PLXNB2O15031 1838 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 ANKRD28O15084 1053 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CHST10O43529 356 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 OR1F1O43749 312 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 TLX2O43763 284 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 LEFTY1O75610 366 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 FGF19O95750 216 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 IL3P08700 152 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CKMT1AP12532 417 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 JUNDP17535 347 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CRISP3P54108 245 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 YBX1P67809 324 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 SPHARQ15513 63 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 Q6ZPB1 254 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 NUDT13Q86X67 352 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 GJD3Q8N144 294 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CACTIN-AS1Q8N1I8 211 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 DNAJC22Q8N4W6 341 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 OR52L1Q8NGH7 329 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 ISG20Q96AZ6 181 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 RNF208Q9H0X6 261 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 C3orf14Q9HBI5 128 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 LCTP09848 1927 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 PIPSLA2A3N6 862 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CNR2P34972 360 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 HOXD12P35452 270 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 PHC1P78364 1004 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 NDUFA9Q16795 377 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CCDC32Q9BV29 185 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 RACGAP1Q9H0H5 632 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 GABARAPL1Q9H0R8 117 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 RMI1Q9H9A7 625 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 SPACA6W5XKT8 324 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 MICAL3Q7RTP6 2002 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 UPK1AO00322 258 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 TYRP14679 529 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 RFX3P48380 749 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 FPGSQ05932 587 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
UBE2D3-209ENST00000394804 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.624e-11■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms