RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 HSPB11Q9Y547 144 aa13.95□□□□□ -0.18
LRRFIP1-204ENST00000392000 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
LRRFIP1-204ENST00000392000 A0A1W2PQL4 384 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 H3BQ06 376 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 AOC2O75106 756 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ARPC4P59998 168 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 LSM11P83369 360 aaKnown RBP eCLIP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 B4GALNT1Q00973 533 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 TBCEQ15813 527 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 LRIF1Q5T3J3 769 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 WDR53Q7Z5U6 358 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 RNF180Q86T96 592 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NPAS3Q8IXF0 933 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 USP7Q93009 1102 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 FATE1Q969F0 183 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ARMC5Q96C12 935 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 OMA1Q96E52 524 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NRTNQ99748 197 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.186e-7■■■■□ 21.6
LRRFIP1-204ENST00000392000 MIEF1Q9NQG6 463 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NLKQ9UBE8 527 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 TBC1D24Q9ULP9 559 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 PATJQ8NI35 1801 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 SCN10AQ9Y5Y9 1956 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NCR1O76036 304 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CYP2A7P20853 494 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 IL12RB1P42701 662 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 SRSF11Q05519 484 aaKnown RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 DUSP7Q16829 419 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 Q6ZVL8 140 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ASB18Q6ZVZ8 466 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CHST14Q8NCH0 376 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NLGN4YQ8NFZ3 816 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 MKLN1Q9UL63 735 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 RIMKLBQ9ULI2 386 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 TMCC3Q9ULS5 477 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CFAP20Q9Y6A4 193 aaKnown RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ZDHHC11BP0C7U3 371 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 SRCP12931 536 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CD22P20273 847 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 NSG1P42857 185 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 MLLT1Q03111 559 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 HSPB3Q12988 150 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 TARDBPQ13148 414 aaKnown RBP eCLIP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 MRPL58Q14197 206 aaKnown RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CRTC2Q53ET0 693 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 RETSATQ6NUM9 610 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 PLET1Q6UQ28 207 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 Q6ZVU0 165 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 ZNF438Q7Z4V0 828 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CSGALNACT1Q8TDX6 532 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 FCGR1BQ92637 280 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 C7orf34Q96L11 122 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CLSTN3Q9BQT9 956 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 BEX1Q9HBH7 125 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CRNNQ9UBG3 495 aaPredicted RBP13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 TRPC4Q9UBN4 977 aa13.94□□□□□ -0.18
LRRFIP1-204ENST00000392000 CHD5Q8TDI0 1954 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 BCHEP06276 602 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 KLK1P06870 262 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 LHCGRP22888 699 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 APEX1P27695 318 aaKnown RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 MAGEA2P43356 314 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 CDK6Q00534 326 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 ZNF385BQ569K4 471 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SERPINA11Q86U17 422 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 THOC6Q86W42 341 aaKnown RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 C19orf18Q8NEA5 215 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SLX1AQ9BQ83 275 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 TRBV4-1A0A0J9YWV2 114 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SCO1O75880 301 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 CHRNB1P11230 501 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 CHMP24386 653 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 MYL9P24844 172 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 CRYBA2P53672 197 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 WNT3P56703 355 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 LMAN2Q12907 356 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 KRR1Q13601 381 aaKnown RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SLC5A12Q1EHB4 618 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 ERICH5Q6P6B1 374 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 RFPL4BQ6ZWI9 263 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 ZNF740Q8NDX6 193 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 ATP6V1C2Q8NEY4 427 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 HUS1BQ8NHY5 278 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 OR2A14Q96R47 310 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 C11orf54Q9H0W9 315 aaPredicted RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 SSR3Q9UNL2 185 aa13.93□□□□□ -0.18
LRRFIP1-204ENST00000392000 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
LRRFIP1-204ENST00000392000 SLC16A8O95907 504 aa13.92□□□□□ -0.18
LRRFIP1-204ENST00000392000 SDC2P34741 201 aa13.92□□□□□ -0.18
LRRFIP1-204ENST00000392000 TAS2R50P59544 299 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms