RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 HMGN2P46Q86SG4 172 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 TMEM126BQ8IUX1 230 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 SPATA6Q9NWH7 488 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 E7EQ34 232 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 H7C0S8 307 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 CD72P21854 359 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 IKBIPQ70UQ0 350 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 C6orf120Q7Z4R8 191 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF761Q86XN6 746 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 LRRC17Q8N6Y2 441 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 OR5AR1Q8NGP9 310 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■□□ 15
NCBP1-202ENST00000375147 ISG20Q96AZ6 181 aaKnown RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 CDCA3Q99618 268 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 DPH2Q9BQC3 489 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-202ENST00000375147 MARCH5Q9NX47 278 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 COMMD9Q9P000 198 aa12.63□□□□□ -0.39
NCBP1-202ENST00000375147 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 IFI30P13284 250 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 IL1RNP18510 177 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 HTR1EP28566 365 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 RPS26P62854 115 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 FAM189BP81408 668 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 FADDQ13158 208 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TLR1Q15399 786 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 RBM48Q5RL73 367 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 OR4N5Q8IXE1 308 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 MINDY1Q8N5J2 469 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 OR7G3Q8NG95 312 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 COMMD3Q9UBI1 195 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 GPR34Q9UPC5 381 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 PCDHGB7Q9Y5F8 929 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 OR52A4PA6NMU1 304 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 IFNA6P05013 189 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 KCNAB2Q13303 367 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 SPATS1Q496A3 300 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 SLC35F1Q5T1Q4 408 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 SLC45A3Q96JT2 553 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 MAPKAP1Q9BPZ7 522 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 COMMD4Q9H0A8 199 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 GSTO2Q9H4Y5 243 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 SDHAF3Q9NRP4 125 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TNFRSF10DQ9UBN6 386 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 PPP6CO00743 305 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 HTRA2O43464 458 aaPredicted RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 DHFRP00374 187 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 RPS3P23396 243 aaKnown RBP eCLIP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TAZQ16635 292 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 GAREM2Q75VX8 874 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 PARS2Q7L3T8 475 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 CARM1Q86X55 608 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 CLECL1Q8IZS7 167 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 CSNK1A1LQ8N752 337 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF676Q8N7Q3 588 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TCEANCQ8N8B7 351 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ACVR1CQ8NER5 493 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 OR4K17Q8NGC6 315 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TIMMDC1Q9NPL8 285 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF222Q9UK12 451 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 MLLT1Q03111 559 aaPredicted RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 RBBP4Q09028 425 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF551Q7Z340 670 aaPredicted RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 COMMD6Q7Z4G1 85 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 NUP43Q8NFH3 380 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 C9orf43Q8TAL5 461 aaPredicted RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 RIT1Q92963 219 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ACTL8Q9H568 366 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
NCBP1-202ENST00000375147 WBP11Q9Y2W2 641 aaKnown RBP12.62□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF726A6NNF4 738 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 LAMP1P11279 417 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 PRDX3P30048 256 aaKnown RBP12.61□□□□□ -0.39
NCBP1-202ENST00000375147 GABRA3P34903 492 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 SLC6A11P48066 632 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF140P52738 457 aaPredicted RBP12.61□□□□□ -0.39
NCBP1-202ENST00000375147 SIM1P81133 766 aaPredicted RBP12.61□□□□□ -0.39
NCBP1-202ENST00000375147 FAM180BQ6P0A1 224 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 PDSS2Q86YH6 399 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.61□□□□□ -0.397e-6■■■■□ 22
NCBP1-202ENST00000375147 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
NCBP1-202ENST00000375147 PEX16Q9Y5Y5 336 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 TCRBV5S1A1TA0A578 114 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 C1orf226A1L170 272 aa12.61□□□□□ -0.39
NCBP1-202ENST00000375147 ZNF3P17036 446 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms