RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TBR1Q16650 682 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 DEPDC1Q5TB30 811 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 CPZQ66K79 652 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 ZCCHC23Q6ZST2 131 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 LAPTM4BQ86VI4 370 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 NUDT13Q86X67 352 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 ANKRD42Q8N9B4 389 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 APOBEC4Q8WW27 367 aaKnown RBP14□□□□□ -0.17
COL9A1-204ENST00000370496 QRFPRQ96P65 431 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 TRMOQ9BU70 441 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 GATA5Q9BWX5 397 aaPredicted RBP14□□□□□ -0.17
COL9A1-204ENST00000370496 SORBS1Q9BX66 1292 aaKnown RBP14□□□□□ -0.17
COL9A1-204ENST00000370496 NPLQ9BXD5 320 aaPredicted RBP14□□□□□ -0.17
COL9A1-204ENST00000370496 SHCBP1LQ9BZQ2 653 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 VN1R1Q9GZP7 353 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 FARSBQ9NSD9 589 aaKnown RBP14□□□□□ -0.17
COL9A1-204ENST00000370496 P4HTMQ9NXG6 502 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 PPT2Q9UMR5 302 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 SLC12A4Q9UP95 1085 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 HS3ST3B1Q9Y662 390 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 SPACA6W5XKT8 324 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 PCSK5Q92824 1860 aa14□□□□□ -0.17
COL9A1-204ENST00000370496 UQCRHLA0A096LP55 91 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 TMEM120BA0PK00 339 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 AGPSO00116 658 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 PLPP1O14494 284 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 UBFD1O14562 309 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 NPHS1O60500 1241 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 B4GALT2O60909 372 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 ALOX12BO75342 701 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 ETHE1O95571 254 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 UQCRHP07919 91 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 CYC1P08574 325 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 C8orf89P0DMQ9 161 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 NEFHP12036 1026 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 HIST1H1TP22492 207 aaPredicted RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 ATP5A1P25705 553 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 TSFMP43897 325 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 RAB38P57729 211 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 CHAF1BQ13112 559 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 TUBB8Q3ZCM7 444 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 AGBL2Q5U5Z8 902 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 FAM219BQ5XKK7 198 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 OR4C11Q6IEV9 310 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 ZNF793Q6ZN11 406 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 UBE3DQ7Z6J8 389 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 NUDCD3Q8IVD9 361 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 SHISA5Q8N114 240 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 EFCAB3Q8N7B9 438 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 ACOT4Q8N9L9 421 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 FAM47BQ8NA70 645 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 CLEC1AQ8NC01 280 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 NACC2Q96BF6 587 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 TLCD1Q96CP7 247 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 CNDP1Q96KN2 507 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 VIPAS39Q9H9C1 493 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 BRF2Q9HAW0 419 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 EML4Q9HC35 981 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 PRDM7Q9NQW5 492 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 C19orf25Q9UFG5 118 aaPredicted RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 FBXL4Q9UKA2 621 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 MRPS33Q9Y291 106 aaKnown RBP13.99□□□□□ -0.17
COL9A1-204ENST00000370496 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
COL9A1-204ENST00000370496 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 WDR91A4D1P6 747 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 SOCS6O14544 535 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 PCDH17O14917 1159 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 DNAJB6O75190 326 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 ULK1O75385 1050 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 SCELO95171 688 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 HSD3B1P14060 373 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 HSD3B2P26439 372 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 HTR6P50406 440 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 ARFIP1P53367 373 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 LIM2P55344 173 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 POLE2P56282 527 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 EEF1A2Q05639 463 aaKnown RBP13.98□□□□□ -0.17
COL9A1-204ENST00000370496 CSTF3Q12996 717 aaKnown RBP13.98□□□□□ -0.17
COL9A1-204ENST00000370496 ABRAXAS2Q15018 415 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 HHATQ5VTY9 493 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 CYP20A1Q6UW02 462 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 MED25Q71SY5 747 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 CUZD1Q86UP6 607 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 TTC9Q92623 222 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 C8orf44Q96CB5 159 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 FER1L6-AS2Q96M78 137 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 UBL7Q96S82 380 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-204ENST00000370496 MRPL1Q9BYD6 325 aaKnown RBP13.98□□□□□ -0.17
COL9A1-204ENST00000370496 LYRM4Q9HD34 91 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 MLXIPLQ9NP71 852 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 LANCL2Q9NS86 450 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 NMRK1Q9NWW6 199 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 PSD3Q9NYI0 1048 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 NKIRAS1Q9NYS0 192 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 AHSPQ9NZD4 102 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 DAPP1Q9UN19 280 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 FIS1Q9Y3D6 152 aa13.98□□□□□ -0.17
COL9A1-204ENST00000370496 KCNMB2Q9Y691 235 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms