RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PSD3Q9NYI0 1048 aa18.11■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ZNF225Q9UK10 706 aa18.11■□□□□ 0.49
HLA-DRB1-201ENST00000360004 WDFY3Q8IZQ1 3526 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 IGLV3-12A0A075B6K2 115 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 IDSB3KWA1 339 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 UBFD1O14562 309 aaKnown RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 AZIN1O14977 448 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 JRKO75564 520 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 BMP10O95393 424 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SERPINE1P05121 402 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 FHP07954 510 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 UROSP10746 265 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 HSD3B1P14060 373 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 HIST1H1TP22492 207 aaPredicted RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ATP5A1P25705 553 aaKnown RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 HSD3B2P26439 372 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 TSFMP43897 325 aaKnown RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 CSTF3Q12996 717 aaKnown RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SCIMPQ6UWF3 145 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 HOMEZQ8IX15 550 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 EFCAB3Q8N7B9 438 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 GBP7Q8N8V2 638 aaPredicted RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ACOT4Q8N9L9 421 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 AGR3Q8TD06 166 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 QRFPRQ96P65 431 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SORBS1Q9BX66 1292 aaKnown RBP18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 PRORYQ9H606 182 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 FBXW2Q9UKT8 454 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 DMXL2Q8TDJ6 3036 aa18.1■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ARGFXA6NJG6 315 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 PLPP1O14494 284 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SEMA3DO95025 777 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 TBX6O95947 436 aaPredicted RBP18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 UMODP07911 640 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 BGNP21810 368 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 CPN2P22792 545 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 MMP11P24347 488 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 RAB38P57729 211 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SLAMF1Q13291 335 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ATP1A4Q13733 1029 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 MPP2Q14168 576 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 TUBB8Q3ZCM7 444 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 ARL13AQ5H913 290 aaPredicted RBP18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SPDYAQ5MJ70 313 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SH2D4BQ5SQS7 431 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 CLEC6AQ6EIG7 209 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 BORAQ6PGQ7 559 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 MRGPREQ86SM8 312 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 FAM47BQ8NA70 645 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 PRDM7Q9NQW5 492 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 VPS29Q9UBQ0 182 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 C19orf25Q9UFG5 118 aaPredicted RBP18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 PPT2Q9UMR5 302 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 LHX6Q9UPM6 363 aa18.09■□□□□ 0.49
HLA-DRB1-201ENST00000360004 SCN3AQ9NY46 2000 aa18.08■□□□□ 0.49
HLA-DRB1-201ENST00000360004 TMEM114B3SHH9 223 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CLDN4O14493 209 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ALOX12BO75342 701 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ETHE1O95571 254 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CHRNGP07510 517 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FURINP09958 794 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 C8orf89P0DMQ9 161 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ACPPP15309 386 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 GRK2P25098 689 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SERPINB3P29508 390 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TLX1P31314 330 aaPredicted RBP18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 HTR6P50406 440 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ARFIP1P53367 373 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RRADP55042 308 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FOXA1P55317 472 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RHDQ02161 417 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 BTKQ06187 659 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ZNF33BQ06732 778 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 STX3Q13277 289 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RUNX2Q13950 521 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 HSP90B2PQ58FF3 399 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TTMPQ5BVD1 217 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 UBE3DQ7Z6J8 389 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 LAPTM4BQ86VI4 370 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TRIM42Q8IWZ5 723 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 DDIASQ8IXT1 998 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 DYDC1Q8WWB3 177 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FER1L6-AS2Q96M78 137 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SH3GL2Q99962 352 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 MRPL1Q9BYD6 325 aaKnown RBP18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 LYARQ9NX58 379 aaKnown RBP18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 PHF11Q9UIL8 331 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SEC16AO15027 2179 aa18.08■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FER1L5A0AVI2 2057 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 PCDH17O14917 1159 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 PRMT3O60678 531 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 DNAJB6O75190 326 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 DHRS4L1P0CG22 281 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SLC18A1P54219 525 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 LIM2P55344 173 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 EEF1A2Q05639 463 aaKnown RBP18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ACSM2AQ08AH3 577 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SLC13A2Q13183 592 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ABRAXAS2Q15018 415 aa18.07■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CCNYL2Q5T2Q4 361 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms