RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 OR6F1Q8NGZ6 308 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 CAPSLQ8WWF8 208 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 TMEM159Q96B96 161 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 FAM83DQ9H4H8 585 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 RNF167Q9H6Y7 350 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 SLC25A19Q9HC21 320 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 TAS2R9Q9NYW1 312 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 GULP1Q9UBP9 304 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 CLEC4EQ9ULY5 219 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 RBMX2Q9Y388 322 aaKnown RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 TET1Q8NFU7 2136 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 NUP214P35658 2090 aaPredicted RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 PRAMEF25A6NGN4 478 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 OPN1SWP03999 348 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 IFNW1P05000 195 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 FURINP09958 794 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 OR1E2P47887 323 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 SYTL3Q4VX76 610 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 SOWAHCQ53LP3 525 aaPredicted RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 TXNDC8Q6A555 127 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 BRAT1Q6PJG6 821 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 WDR36Q8NI36 951 aaKnown RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 MED8Q96G25 268 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 OR5M11Q96RB7 305 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 EFCAB11Q9BUY7 163 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 TPK1Q9H3S4 243 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 OBSL1O75147 1896 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 PRRG1O14668 218 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SOD2P04179 222 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZNF8P17098 575 aaPredicted RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 TNFSF8P32971 234 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 CYP4F2P78329 520 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SLC7A9P82251 487 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 RAB33AQ14088 237 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 NCF4Q15080 339 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZNF385BQ569K4 471 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 KLHL17Q6TDP4 642 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SLCO4C1Q6ZQN7 724 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 IKBIPQ70UQ0 350 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 TCEAL8Q8IYN2 117 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SLC7A5P1Q8MH63 180 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 AQP11Q8NBQ7 271 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 PPCDCQ96CD2 204 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SCLYQ96I15 445 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 OR2A14Q96R47 310 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZSCAN5AQ9BUG6 496 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZNF334Q9HCZ1 680 aaPredicted RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 SLC25A13Q9UJS0 675 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 CENPBD1B2RD01 187 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 IDH3BO43837 385 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 TNFRSF1BP20333 461 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 IMPA1P29218 277 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 RPS5P46782 204 aaKnown RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 RORCP51449 518 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 RPS13P62277 151 aaKnown RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 SP3Q02447 781 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 GPR50Q13585 617 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 SSX1Q16384 188 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZNF770Q6IQ21 691 aaPredicted RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.94■□□□□ 0.36e-6■□□□□ 8.7
RTN4-204ENST00000357732 LAS2Q8IYD9 372 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 OPALINQ96PE5 141 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 TP63Q9H3D4 680 aaPredicted RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 ZDHHC6Q9H6R6 413 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 IL21Q9HBE4 155 aa16.94■□□□□ 0.3
RTN4-204ENST00000357732 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 LSM2Q9Y333 95 aaKnown RBP16.94■□□□□ 0.3
RTN4-204ENST00000357732 PLXNA2O75051 1894 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 KRT87PA6NCN2 255 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 WASH3PC4AMC7 463 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 PCDH17O14917 1159 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 C6orf47O95873 294 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 PSMA1P25786 263 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 VIPR1P32241 457 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 DDOSTP39656 456 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 SF1Q15637 639 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 RAVER1Q8IY67 606 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 NLGN4XQ8N0W4 816 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 TAGAPQ8N103 731 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 KLHL6Q8WZ60 621 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 VPS35Q96QK1 796 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 MND1Q9BWT6 205 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 RC3H2Q9HBD1 1191 aaKnown RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 SRRDQ9UH36 339 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 TBC1D24Q9ULP9 559 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 CAB39Q9Y376 341 aaPredicted RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 IQCMA0A1B0GVH7 501 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 GRM6O15303 877 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 ATG13O75143 517 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 GPX5O75715 221 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 RB1P06400 928 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 ITGB7P26010 798 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 CHI3L1P36222 383 aaPredicted RBP16.93■□□□□ 0.3
RTN4-204ENST00000357732 NR4A2P43354 598 aa16.93■□□□□ 0.3
RTN4-204ENST00000357732 CRISP3P54108 245 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms