RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 AQP1P29972 269 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 MRPS6P82932 125 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ARHGEF7Q14155 803 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 TAF1CQ15572 869 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 LCN1P1Q5VSP4 162 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 PLET1Q6UQ28 207 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 FAM217AQ8IXS0 508 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 CLDN19Q8N6F1 224 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 UPRTQ96BW1 309 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 DIRAS2Q96HU8 199 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 DCLRE1CQ96SD1 692 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 PIP5K1AQ99755 562 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 EBPLQ9BY08 206 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 FLRT1Q9NZU1 646 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 SSR3Q9UNL2 185 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 PCDHGB7Q9Y5F8 929 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 SLC43A1O75387 559 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 CDRT1O95170 752 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 CPSF4O95639 269 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 RECKO95980 971 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 CKMT1AP12532 417 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 COX7A2P14406 83 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZXDBP98169 803 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 EEF1A2Q05639 463 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF33BQ06732 778 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 TUSC3Q13454 348 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 FLYWCH1Q4VC44 716 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 AMIGO1Q86WK6 493 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 SYT12Q8IV01 421 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ESX1Q8N693 406 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 DNAJA4Q8WW22 397 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 KLHL6Q8WZ60 621 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 AP2M1Q96CW1 435 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 NECTIN4Q96NY8 510 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ABCG8Q9H221 673 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 ING3Q9NXR8 418 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 MAT2BQ9NZL9 334 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 REV1Q9UBZ9 1251 aa11.6□□□□□ -0.55
SMARCAL1-201ENST00000357276 F5H5T6 163 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SCAMP2O15127 329 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SMAD6O43541 496 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 GASTP01350 101 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CPEP16870 476 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CTRB1P17538 263 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 ACRV1P26436 265 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 AOAHP28039 575 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 OR1E2P47887 323 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SLC9A3P48764 834 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CDH4P55283 916 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SNRPD2P62316 118 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 DAB2P98082 770 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 TAGLNQ01995 201 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 NFATC2Q13469 925 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 DDI2Q5TDH0 399 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 FAM205BPQ63HN1 556 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 FRG2Q64ET8 278 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 NPLOC4Q8TAT6 608 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SH3KBP1Q96B97 665 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 UROC1Q96N76 676 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 FRG2BQ96QU4 278 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZIC5Q96T25 663 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SYNDIG1Q9H7V2 258 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 GLTPQ9NZD2 209 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 KCND3Q9UK17 655 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 SNX11Q9Y5W9 270 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 DOCK3Q8IZD9 2030 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 TRIM77I1YAP6 450 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 J3KTA2 159 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 PRAMEF1O95521 474 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CLEC2LP0C7M8 214 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CBSLP0DN79 551 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 PSKH1P11801 424 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 PTBP1P26599 531 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CBSP35520 551 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 ABATP80404 500 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 C12orf73Q69YU5 71 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 GLCCI1Q86VQ1 547 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CAMKK1Q8N5S9 505 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 GOT1L1Q8NHS2 421 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 B3GALT6Q96L58 329 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 DUSP26Q9BV47 211 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 MYL12BO14950 172 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 OAZ2O95190 189 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 MYL12AP19105 171 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 GRK4P32298 578 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 RPIAP49247 311 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 MAB21L1Q13394 359 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 CRB2Q5IJ48 1285 aa11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 METAP1DQ6UB28 335 aaPredicted RBP11.59□□□□□ -0.55
SMARCAL1-201ENST00000357276 ZNF730Q6ZMV8 503 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms