RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 GYPBP06028 91 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 FAM157BP0CG42 384 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TROVE2P10155 538 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD47-201ENST00000355354 BMP2P12643 396 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 OR10A3P58181 314 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 PFN3P60673 137 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ST3GAL3Q11203 375 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 OXA1LQ15070 435 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 C6orf141Q5SZD1 244 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 CCDC70Q6NSX1 233 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ZNF793Q6ZN11 406 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TEX26Q8N6G2 289 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 RASGEF1AQ8N9B8 481 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TAMM41Q96BW9 452 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 OSBPL10Q9BXB5 764 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 HDHD5Q9BXW7 423 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 REXO4Q9GZR2 422 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 SAP130Q9H0E3 1048 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 PPP1R3EQ9H7J1 279 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 LRRC4Q9HBW1 653 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 NUFIP1Q9UHK0 495 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 SLC8A2Q9UPR5 921 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 C2orf92A0A1B0GVN3 265 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SYN3O14994 580 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 IMPDH1P20839 514 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ACVR1Q04771 509 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 IL18R1Q13478 541 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 RARS2Q5T160 578 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 CYP20A1Q6UW02 462 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 CCDC81Q6ZN84 652 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SPRED1Q7Z699 444 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 C11orf96Q7Z7L8 435 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 EXOC8Q8IYI6 725 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SLC5A8Q8N695 610 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ADCY4Q8NFM4 1077 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ZNF461Q8TAF7 563 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 ALKBH8Q96BT7 664 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 NAP1L4Q99733 375 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 AARSD1Q9BTE6 412 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 FOXQ1Q9C009 403 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TP63Q9H3D4 680 aaPredicted RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 XKR8Q9H6D3 395 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 HHATLQ9HCP6 504 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 DERAQ9Y315 318 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TESMINQ9Y4I5 508 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 TMEM184BQ9Y519 407 aaPredicted RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 TRBV4-1A0A0J9YWV2 114 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 DCTN6O00399 190 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 IFRD1O00458 451 aaPredicted RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 CD3EAPO15446 510 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 TNNC2P02585 160 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 KIR2DL1P43626 348 aaPredicted RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 GALK2Q01415 458 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 GALNT1Q10472 559 aaPredicted RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 CBX3Q13185 183 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 KHDRBS2Q5VWX1 349 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 OR4N5Q8IXE1 308 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 RTL3Q8N8U3 475 aaKnown RBP5.34□□□□□ -1.55
CD47-201ENST00000355354 LPCAT1Q8NF37 534 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 CEP76Q8TAP6 659 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 FOXN4Q96NZ1 517 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 RTKNQ9BST9 563 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 NTMT1Q9BV86 223 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 C20orf141Q9NUB4 165 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 AIG1Q9NVV5 245 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SLC6A5Q9Y345 797 aa5.34□□□□□ -1.55
CD47-201ENST00000355354 SH3PXD2BA1X283 911 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 ARHGEF33A8MVX0 844 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 KMOO15229 486 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 CAPN5O15484 640 aaPredicted RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 SNRPB2P08579 225 aaKnown RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 TPP2P29144 1249 aaPredicted RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 EVI2BP34910 448 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 OXCT1P55809 520 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 CLDN17P56750 224 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 HERVK_113P63132 956 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 TOR1AIP1Q5JTV8 583 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.34□□□□□ -1.56
CD47-201ENST00000355354 CCNJQ5T5M9 372 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 FAM69AQ5T7M9 428 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 TCTN3Q6NUS6 607 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 DCP1BQ8IZD4 617 aaKnown RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 ZNF513Q8N8E2 541 aaPredicted RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 FNDC5Q8NAU1 212 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 ST6GAL2Q96JF0 529 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 ERVK-6Q9BXR3 956 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 ISG20L2Q9H9L3 353 aaKnown RBP5.34□□□□□ -1.56
CD47-201ENST00000355354 FZD3Q9NPG1 666 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 FETUBQ9UGM5 382 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 SCOCQ9UIL1 159 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 PCDHB8Q9UN66 801 aa5.34□□□□□ -1.56
CD47-201ENST00000355354 DNHD1Q96M86 4753 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 KCNE1BA0A087WTH5 132 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 M0R3H8 397 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 PSMD11O00231 422 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 CLOCKO15516 846 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 UGT2B11O75310 529 aa5.33□□□□□ -1.56
CD47-201ENST00000355354 KRT38O76015 456 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms