RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CCSAPQ6IQ19 270 aaPredicted RBP10.94□□□□□ -0.66
CAPN9-202ENST00000354537 USP45Q70EL2 814 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 GATAD2AQ86YP4 633 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 LAS2Q8IYD9 372 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 TCTE3Q8IZS6 198 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 OR9Q2Q8NGE9 314 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 OR52J3Q8NH60 311 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.94□□□□□ -0.66
CAPN9-202ENST00000354537 SLC25A46Q96AG3 418 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 REPS1Q96D71 796 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 ECHDC3Q96DC8 303 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 ASIC4Q96FT7 647 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 FAM83CQ9BQN1 747 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 MED18Q9BUE0 208 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 TM6SF2Q9BZW4 377 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 RNF38Q9H0F5 515 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 SGK2Q9HBY8 427 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 KLHL21Q9UJP4 597 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 MGAT4BQ9UQ53 548 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 ANGPT4Q9Y264 503 aa10.94□□□□□ -0.66
CAPN9-202ENST00000354537 C2orf78A6NCI8 922 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 NPIPB15A6NHN6 443 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 K7ERQ8 282 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 TLR4O00206 839 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 RGS5O15539 181 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 GPR37L1O60883 481 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ADRA2AP08913 450 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 C1SP09871 688 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ARAFP10398 606 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ETFAP13804 333 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 PRKCAP17252 672 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ERP29P30040 261 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CDH18Q13634 790 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 BAK1Q16611 211 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 DUSP7Q16829 419 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SLC35F1Q5T1Q4 408 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 C12orf73Q69YU5 71 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CCDC149Q6ZUS6 474 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 PEX5LQ8IYB4 626 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CACTIN-AS1Q8N1I8 211 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 C2orf69Q8N8R5 385 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 AQP11Q8NBQ7 271 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ANGPTL6Q8NI99 470 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SKA2Q8WVK7 121 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 WBP2Q969T9 261 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 VPS35Q96QK1 796 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SLC35A5Q9BS91 424 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ABCG8Q9H221 673 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 TAS2R16Q9NYV7 291 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 DKK3Q9UBP4 350 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 BACE2Q9Y5Z0 518 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 DOCK3Q8IZD9 2030 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 A0A1W2PQ09 198 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 A0A1W2PQ67 120 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 KRT87PA6NCN2 255 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 QSOX1O00391 747 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SMAD6O43541 496 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CSO75390 466 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 PSIP1O75475 530 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SLCO2B1O94956 709 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 GASTP01350 101 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 IFNW1P05000 195 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 IRF1P10914 325 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CKBP12277 381 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 PTBP1P26599 531 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SLC11A1P49279 550 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 PTSQ03393 145 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 C1DQ13901 141 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 TAF1CQ15572 869 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF438Q7Z4V0 828 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 TSPAN33Q86UF1 283 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 VRK3Q8IV63 474 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 RNF175Q8N4F7 328 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 OR2AP1Q8NGE2 309 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 CDC26Q8NHZ8 85 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 NFKBIDQ8NI38 313 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ASZ1Q8WWH4 475 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 FRMD6Q96NE9 622 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 MTERF1Q99551 399 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 NMNAT1Q9HAN9 279 aaPredicted RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 EXOSC4Q9NPD3 245 aaKnown RBP10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ISYNA1Q9NPH2 558 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 DIABLOQ9NR28 239 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ABCB8Q9NUT2 735 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 ACOXLQ9NUZ1 547 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
CAPN9-202ENST00000354537 FOXE1O00358 373 aaPredicted RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 AP3D1O14617 1153 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 TPST2O60704 377 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ENTPD6O75354 484 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OPN1SWP03999 348 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 CPN2P22792 545 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OR1E2P47887 323 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms