RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 EIF5A2Q9GZV4 153 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 OR51J1Q9H342 316 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PLEKHA1Q9HB21 404 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 NPAP1Q9NZP6 1156 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TRAV19A0A0A6YYK7 116 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 A0A1W2PPK0 400 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TTC34A8MYJ7 566 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TXNL1O43396 289 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 C6orf47O95873 294 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PIGRP01833 764 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 IL3P08700 152 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TNFSF8P32971 234 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 ETV1P50549 477 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 LILRA4P59901 499 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SELPLGQ14242 412 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PRAMEF13Q5VWM6 474 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 LYSMD3Q7Z3D4 306 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 MUL1Q969V5 352 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM125Q96AQ2 219 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SECISBP2Q96T21 854 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 CCM2Q9BSQ5 444 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TEX10Q9NXF1 929 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 GPSM3Q9Y4H4 160 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 LOC105369274A0A096LPK9 316 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM221A6NGB7 291 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PDGFAP04085 211 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 STXBP1P61764 594 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 RPL19P84098 196 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 BEX3Q00994 111 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 KEAP1Q14145 624 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PUM1Q14671 1186 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SF3A2Q15428 464 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 CRTC1Q6UUV9 634 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 OR4N4Q8N0Y3 316 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TXNDC15Q96J42 360 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 H3BSH0 61 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 SSX5O60225 188 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 ALX3O95076 343 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 FXYD6P3P58550 94 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 VAMP2P63027 116 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TARBP2Q15633 366 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM135Q86UB9 458 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM184CQ9NVA4 438 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 LOC102723532A0A0G2JNH3 316 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 RCBTB2O95199 551 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 GRK6P43250 576 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 FGL1Q08830 312 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 ST3GAL3Q11203 375 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 MPP7Q5T2T1 576 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 GTPBP8Q8N3Z3 284 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM102Q8N9M5 508 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 DPH2Q9BQC3 489 aaPredicted RBP11.68□□□□□ -0.54
COL12A1-202ENST00000345356 BCO2Q9BYV7 579 aa11.68□□□□□ -0.54
COL12A1-202ENST00000345356 GMFGO60234 142 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 KRT33AO76009 404 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 KLK1P06870 262 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SRCP12931 536 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF35P13682 527 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 DPEP1P16444 411 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 RPS5P46782 204 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLC35F5Q8WV83 523 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 PCNPQ8WW12 178 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 RPL3LQ92901 407 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 NAT1P18440 290 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SH3BP2P78314 561 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SF1Q15637 639 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SLC22A10Q63ZE4 541 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 GALNT10Q86SR1 603 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 OSTF1Q92882 214 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 MAFFQ9ULX9 164 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 TMEM98Q9Y2Y6 226 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 RIPK3Q9Y572 518 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 UBFD1O14562 309 aaKnown RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CTDSP2O14595 271 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 HOXD8P13378 290 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CD6P30203 668 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SHMT2P34897 504 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 KCNC1P48547 511 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CRYBB1P53674 252 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 GPR68Q15743 365 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 REEP3Q6NUK4 255 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CLEC20AQ6ZU45 233 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 RGL4Q8IZJ4 473 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 ZNF557Q8N988 423 aaPredicted RBP11.67□□□□□ -0.54
COL12A1-202ENST00000345356 COQ8BQ96D53 544 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 CXorf40BQ96DE9 158 aa11.67□□□□□ -0.54
COL12A1-202ENST00000345356 SPACA7Q96KW9 195 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms