RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ARHGEF39Q8N4T4 335 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 UTP4Q969X6 686 aaKnown RBP15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 COQ8BQ96D53 544 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 MTERF3Q96E29 417 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 OR52E6Q96RD3 313 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 PRPF18Q99633 342 aaKnown RBP15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 DPYSL5Q9BPU6 564 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 RXFP3Q9NSD7 469 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 STARD5Q9NSY2 213 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 SEMA4GQ9NTN9 838 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 RRP15Q9Y3B9 282 aaKnown RBP15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 SLC22A7Q9Y694 548 aa15.51■□□□□ 0.07
CEACAM1-202ENST00000344391 A8MU76 341 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 LAMP1P11279 417 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CD59P13987 128 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ARL4DP49703 201 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 MTTPP55157 894 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 WNT3P56703 355 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CORO7P57737 925 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 MAPKAPK3Q16644 382 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CLPPQ16740 277 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CPTPQ5TA50 214 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 OR4F3Q6IEY1 312 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ANKRD26P1Q6NSI1 321 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 C8orf82Q6P1X6 216 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 MSANTD1Q6ZTZ1 278 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 R3HCC1LQ7Z5L2 792 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 OR4D9Q8NGE8 314 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 GTF2H4Q92759 462 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ATOH1Q92858 354 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 EDEM2Q9BV94 578 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ZNF768Q9H5H4 540 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 COPS7BQ9H9Q2 264 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 WDR41Q9HAD4 459 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 GID8Q9NWU2 228 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 TEX10Q9NXF1 929 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CROTQ9UKG9 612 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ASB4Q9Y574 426 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 MUC6Q6W4X9 2439 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 FXYD1O00168 92 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 SCN2BO60939 215 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 NPPAP01160 153 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ANKRD34CP0C6C1 535 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 NELFEP18615 380 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 DDCP20711 480 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ACP1P24666 158 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 PGM1P36871 562 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 NFYCQ13952 458 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 HEPACAMQ14CZ8 416 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 CSRP2Q16527 193 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 TRMT5Q32P41 509 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 DEFB134Q4QY38 66 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 TCTE1Q5JU00 501 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ARHGAP22Q7Z5H3 698 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 MCUR1Q96AQ8 359 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 SERINC2Q96SA4 455 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 GPATCH1Q9BRR8 931 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 DUSP26Q9BV47 211 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 TMEM9BQ9NQ34 198 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 ENAMQ9NRM1 1142 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 LYARQ9NX58 379 aaKnown RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 SH3BP4Q9P0V3 963 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 SLAMF8Q9P0V8 285 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 PCDHGA7Q9Y5G6 932 aa15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 NUP214P35658 2090 aaPredicted RBP15.5■□□□□ 0.07
CEACAM1-202ENST00000344391 A0A088AWK7 358 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 NTN3O00634 580 aaPredicted RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 TBX19O60806 448 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 LRP3O75074 770 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 GP1BAP07359 652 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 MSL3P1P0C860 447 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 ZNF10P21506 573 aaPredicted RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 NBL1P41271 181 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 PSME3P61289 254 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 KCNAB1Q14722 419 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 ZNF385BQ569K4 471 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 TMTC4Q5T4D3 741 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 DLEU7Q6UYE1 221 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 MMP21Q8N119 569 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 PPCDCQ96CD2 204 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 LRRC58Q96CX6 371 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 HOPXQ9BPY8 73 aaPredicted RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 THTPAQ9BU02 230 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 BHLHE41Q9C0J9 482 aaPredicted RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 IRF2BPLQ9H1B7 796 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 MMADHCQ9H3L0 296 aaPredicted RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 RMND5AQ9H871 391 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 IL1RL2Q9HB29 575 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 SERHLQ9NQF3 203 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 FAM120CQ9NX05 1096 aaKnown RBP15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 FTSJ1Q9UET6 329 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 MAN2B2Q9Y2E5 1009 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 ATG4BQ9Y4P1 393 aa15.49■□□□□ 0.07
CEACAM1-202ENST00000344391 IGHV5-10-1A0A0J9YXX1 117 aa15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 FITM1A5D6W6 292 aa15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 H3BMH7 237 aa15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 GALR3O60755 368 aaPredicted RBP15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 GUCY1B2O75343 617 aa15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 LMNAP02545 664 aaKnown RBP15.48■□□□□ 0.07
CEACAM1-202ENST00000344391 DRD2P14416 443 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms