RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 JAK1P23458 1154 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SERPINB1P30740 379 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 BSGP35613 385 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 GRK3P35626 688 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 ESRRGP62508 458 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RELAQ04206 551 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TMED1Q13445 227 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RCAN2Q14206 197 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RPS6KA2Q15349 733 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 FRMPD2BQ6IN97 320 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 DGLUCYQ7Z3D6 616 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 OR4N4Q8N0Y3 316 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 MINDY1Q8N5J2 469 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TMEM102Q8N9M5 508 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 FAM181AQ8N9Y4 354 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SUMF1Q8NBK3 374 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 BHLHE22Q8NFJ8 381 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TM4SF19Q96DZ7 209 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 VPS50Q96JG6 964 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 EFHD1Q9BUP0 239 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 GTPBP2Q9BX10 602 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RAB33BQ9H082 229 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 COPS7BQ9H9Q2 264 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 ANKMY1Q9P2S6 941 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 EPHA6Q9UF33 1036 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 CAPN5O15484 640 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SYPP08247 313 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 CD1CP29017 333 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TTKP33981 857 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 GPR3P46089 330 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RPS15AP62244 130 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TCF15Q12870 199 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 VPS26BQ4G0F5 336 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SPIN4Q56A73 249 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 CACHD1Q5VU97 1274 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 GUSBP11Q6P575 273 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 KLHL35Q6PF15 583 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RIMKLAQ8IXN7 391 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 EID2Q8N6I1 236 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 AMER3Q8N944 861 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 ZBTB8BQ8NAP8 495 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TTLQ8NG68 377 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 TSSK3Q96PN8 268 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SEMA6CQ9H3T2 930 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 WDR41Q9HAD4 459 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SUCOQ9UBS9 1254 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 EXO1Q9UQ84 846 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RUVBL1Q9Y265 456 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 BTBD3Q9Y2F9 522 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 LNP1A1A4G5 178 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 SLC9B1P1A6NJY1 282 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 ACOT8O14734 319 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 P2RX6O15547 441 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 EEDO75530 441 aaKnown RBP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 SEMA3DO95025 777 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 CTSBP07858 339 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 SNRPB2P08579 225 aaKnown RBP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 PRPS2P11908 318 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 ZNF26P17031 533 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 TIA1P31483 386 aaKnown RBP eCLIP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 CSF2RBP32927 897 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 CLDN8P56748 225 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 PHEXP78562 749 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 MAPRE2Q15555 327 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 PERM1Q5SV97 790 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 C6orf52Q5T4I8 152 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 DBX2Q6ZNG2 339 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 Q6ZNX1 250 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 RNF44Q7L0R7 432 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 Q8N9G6 341 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 SMYD1Q8NB12 490 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 CCDC74AQ96AQ1 378 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 VPS33AQ96AX1 596 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 EME1Q96AY2 570 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 RCN3Q96D15 328 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 MS4A6EQ96DS6 147 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 ASB9Q96DX5 294 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 NPAS2Q99743 824 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 PKP2Q99959 881 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 SLC6A16Q9GZN6 736 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 TMEM45AQ9NWC5 275 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 TMEM9Q9P0T7 183 aa13.98□□□□□ -0.17
CXCL12-201ENST00000343575 PAIP2BQ9ULR5 123 aaKnown RBP13.98□□□□□ -0.17
CXCL12-201ENST00000343575 IGHV5-51A0A0C4DH38 117 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 H3BNH8 94 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 H3BSA7 217 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 KHNYNO15037 678 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 NDUFS4O43181 175 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 SERPIND1P05546 499 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 ANXA4P09525 319 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 GSTM2P28161 218 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CD97P48960 835 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 POLR2JP52435 117 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PHC1P78364 1004 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 KCTD21Q4G0X4 260 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 ZNF793Q6ZN11 406 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms