RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 GFOD1Q9NXC2 390 aa3.33□□□□□ -1.88
CCDC66-202ENST00000341455 SLC17A6Q9P2U8 582 aa3.33□□□□□ -1.88
CCDC66-202ENST00000341455 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
CCDC66-202ENST00000341455 SNX5Q9Y5X3 404 aa3.33□□□□□ -1.88
CCDC66-202ENST00000341455 ZFHX4Q86UP3 3567 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MYO18BQ8IUG5 2567 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 EXPH5Q8NEV8 1989 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A0A096LPK6 155 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A8MX80 341 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 C21orf140B9A014 251 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ZBTB14O43829 449 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 EIF4EBP3O60516 100 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MTX2O75431 263 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TBX6O95947 436 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 VIPP01282 170 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RPLP0P05388 317 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ANXA5P08758 320 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CLEC2LP0C7M8 214 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RAC2P15153 192 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 KRT15P19012 456 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 HPDP32754 393 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 HNF4AP41235 474 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PREPP48147 710 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ARL4DP49703 201 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 NUMBP49757 651 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RNF4P78317 190 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PSPHP78330 225 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CSNK1G2P78368 415 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ACY1Q03154 408 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ASPHQ12797 758 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TRAF3Q13114 568 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CUL3Q13618 768 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CASP8Q14790 479 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TBR1Q16650 682 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PHKG1Q16816 387 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 XKR7Q5GH72 579 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CT83Q5H943 113 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 KANK2Q63ZY3 851 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 AGTRAPQ6RW13 159 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CRTC3Q6UUV7 619 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PIWIL4Q7Z3Z4 852 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CAMKMTQ7Z624 323 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CACUL1Q86Y37 369 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ZCCHC7Q8N3Z6 543 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 DEFB119Q8N690 84 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RCBTB1Q8NDN9 531 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 IPCEF1Q8WWN9 437 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 IFT81Q8WYA0 676 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 UBE2E3Q969T4 207 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CXorf40BQ96DE9 158 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MAELQ96JY0 434 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CNDP1Q96KN2 507 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 SLC46A1Q96NT5 459 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 SMC6Q96SB8 1091 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM31Q9BZY9 425 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 UNKQ9C0B0 810 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ZMAT3Q9HA38 289 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MED4Q9NPJ6 270 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 IRAK4Q9NWZ3 460 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PLEKHB1Q9UF11 243 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 GRID1Q9ULK0 1009 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PLCL2Q9UPR0 1127 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CLCA2Q9UQC9 943 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 KCNK6Q9Y257 313 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 SF3B6Q9Y3B4 125 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PI4KAP42356 2102 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TDRD6O60522 2096 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A0A087X0M5 115 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 LOC102723996A0A087X1L8 192 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A0A1B0GX30 115 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A0A1W2PPH5 198 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 FAM47DPA6NHR8 397 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 A8MT66 165 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM49D1C9J1S8 452 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 GOLGA8KD6RF30 607 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 E5RI56 91 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 LINC01387J3KSC0 135 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ZNF561-AS1K7EIQ3 104 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 K7EPI3 171 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 OR7A17O14581 309 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 DSCR3O14972 297 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 SORBS2O94875 1100 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MLYCDO95822 493 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 GSNP06396 782 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 JUPP14923 745 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PRDX3P30048 256 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CMPK1P30085 196 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 KCNC1P48547 511 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 TBPL1P62380 186 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RAB1AP62820 205 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CXADRP78310 365 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 MC1RQ01726 317 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 ID3Q02535 119 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 USP10Q14694 798 aaKnown RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 CAPN13Q6MZZ7 669 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-202ENST00000341455 RHBDD2Q6NTF9 364 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 PRMT9Q6P2P2 845 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 KLC3Q6P597 504 aa3.32□□□□□ -1.88
CCDC66-202ENST00000341455 SUSD1Q6UWL2 747 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms