RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MED27Q6P2C8 311 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 NEK10Q6ZWH5 1172 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 ASPNQ9BXN1 380 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 CKAP5Q14008 2032 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 KPNA3O00505 521 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-201ENST00000340437 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 LEFTY1O75610 366 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 SLC15A1P46059 708 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 AP1S2P56377 157 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 FADDQ13158 208 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 TBCEQ15813 527 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF181Q2M3W8 571 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 IQCCQ4KMZ1 466 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 NXNL2Q5VZ03 156 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF783Q6ZMS7 281 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 DDX53Q86TM3 631 aaKnown RBP13.79□□□□□ -0.2
CPSF7-201ENST00000340437 RBM45Q8IUH3 476 aaKnown RBP13.79□□□□□ -0.2
CPSF7-201ENST00000340437 CBARPQ8N350 705 aaPredicted RBP13.79□□□□□ -0.2
CPSF7-201ENST00000340437 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 UBASH3BQ8TF42 649 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 MMP28Q9H239 520 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 PCDHGA2Q9Y5H1 932 aa13.79□□□□□ -0.2
CPSF7-201ENST00000340437 A0A1W2PRB8 838 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SNX4O95219 450 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 POP4O95707 220 aaKnown RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 IGHA2P01877 340 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TIA1P31483 386 aaKnown RBP eCLIP13.78□□□□□ -0.25e-16■■■■■ 27.7
CPSF7-201ENST00000340437 PRKAG1P54619 331 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TMC5Q6UXY8 1006 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 GALNT13Q8IUC8 556 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 GPR151Q8TDV0 419 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TTYH2Q9BSA4 534 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 LINC00597Q9H2U6 94 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 RMI1Q9H9A7 625 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 NMNAT1Q9HAN9 279 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 CPNE5Q9HCH3 593 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF282Q9UDV7 671 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 WBP11Q9Y2W2 641 aaKnown RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 COL4A4P53420 1690 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 FADS2P1A8MWK0 482 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 PLK4O00444 970 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 HAT1O14929 419 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SGTAO43765 313 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF8P17098 575 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 IMPA1P29218 277 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 ASMTP46597 345 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 GGTA1PQ4G0N0 100 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 PNCKQ6P2M8 343 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 GDPD4Q6W3E5 623 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 PITX2Q99697 317 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 BCL7BQ9BQE9 202 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TMA7Q9Y2S6 64 aaKnown RBP13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TRBV4-1A0A0J9YWV2 114 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 GFYI3L273 518 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 INHAP05111 366 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 IL3P08700 152 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 CHMP24386 653 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TNFSF8P32971 234 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TEAD4Q15561 434 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 ARMCX6Q7L4S7 300 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 TCEANCQ8N8B7 351 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 RASGEF1AQ8N9B8 481 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 OVCA2Q8WZ82 227 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 OTULINQ96BN8 352 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 PLXNA4Q9HCM2 1894 aa13.78□□□□□ -0.2
CPSF7-201ENST00000340437 CCL16O15467 120 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 GPX5O75715 221 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 AP2A2O94973 939 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 TBPL1P62380 186 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 RACK1P63244 317 aaKnown RBP13.77□□□□□ -0.2
CPSF7-201ENST00000340437 DOC2BQ14184 412 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 TRIM40Q6P9F5 258 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 CEACAM20Q6UY09 585 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 AP2M1Q96CW1 435 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 ZNF486Q96H40 463 aaPredicted RBP13.77□□□□□ -0.2
CPSF7-201ENST00000340437 SLC30A2Q9BRI3 323 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.2
CPSF7-201ENST00000340437 ABCG4Q9H172 646 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 REEP4Q9H6H4 257 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 KLHL20Q9Y2M5 609 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 HCN4Q9Y3Q4 1203 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 PLXNA3P51805 1871 aa13.77□□□□□ -0.2
CPSF7-201ENST00000340437 TAF4O00268 1085 aa13.77□□□□□ -0.21
CPSF7-201ENST00000340437 LEFTY2O00292 366 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms