RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ELAVL4P26378 380 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 TRHRP34981 398 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 PLA2G16P53816 162 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 LAPTM5Q13571 262 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SLBPQ14493 270 aaKnown RBP eCLIP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 TERF2Q15554 542 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 TGFBIQ15582 683 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 HIST2H2ACQ16777 129 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 PAGE2BQ5JRK9 111 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ZNF468Q5VIY5 522 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 HIST2H2AA3Q6FI13 130 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 Q6ZPB1 254 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SLCO4C1Q6ZQN7 724 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CAPN12Q6ZSI9 719 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 GDF7Q7Z4P5 450 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 MAATS1Q7Z4T9 603 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CEP97Q8IW35 865 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 KLHDC8AQ8IYD2 350 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CPSF7Q8N684 471 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SNX31Q8N9S9 440 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 NFAM1Q8NET5 270 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ADAMTS18Q8TE60 1221 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ANKRD49Q8WVL7 239 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 RHBDF1Q96CC6 855 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 MS4A6EQ96DS6 147 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 VMP1Q96GC9 406 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 PDLIM2Q96JY6 352 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 KRT12Q99456 494 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 DERL2Q9GZP9 239 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 REXO4Q9GZR2 422 aaKnown RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 NT5DC2Q9H857 520 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 TRIM45Q9H8W5 580 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 COPS7BQ9H9Q2 264 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-202ENST00000337571 DNAJC11Q9NVH1 559 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 GPRC5BQ9NZH0 403 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 ERVK-11Q9UQG0 969 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 MEMO1Q9Y316 297 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 SNX24Q9Y343 169 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CLCA3PQ9Y6N3 262 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 CREBBPQ92793 2442 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 APCP25054 2843 aa9.96□□□□□ -0.82
CAPN3-202ENST00000337571 DCHS2Q6V1P9 2916 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 IGKV3D-11A0A0A0MRZ8 115 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 A0A0G2JN53 185 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 E7ESA3 106 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 PEX1O43933 1283 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 ITGA10O75578 1167 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 STK16O75716 305 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 WISP2O76076 250 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CLDN14O95500 239 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 IFNA16P05015 189 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 STMN1P16949 149 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 TNNI3P19429 210 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 GGT5P36269 586 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 RPL21P46778 160 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SLC6A12P48065 614 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 MEOX1P50221 254 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SSR4P51571 173 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 RAB38P57729 211 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 ATP6V0D1P61421 351 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 STX4Q12846 297 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 RUNX2Q13950 521 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 FASTKD3Q14CZ7 662 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 EFTUD2Q15029 972 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 C18orf21Q32NC0 220 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 XKR6Q5GH73 641 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CDKL4Q5MAI5 379 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SULT1C3Q6IMI6 304 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 DOLPP1Q86YN1 238 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SULF2Q8IWU5 870 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 ZNF595Q8IYB9 648 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CYP4Z2PQ8N1L4 340 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 TMEM132CQ8N3T6 1108 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 C7orf57Q8NEG2 295 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 OR2L5Q8NG80 312 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 AGAP11Q8TF27 550 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 MTFMTQ96DP5 389 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SERINC2Q96SA4 455 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 WDR83Q9BRX9 315 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 ROGDIQ9GZN7 287 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 TIMMDC1Q9NPL8 285 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 CD274Q9NZQ7 290 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 MTO1Q9Y2Z2 717 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 YARS2Q9Y2Z4 477 aaKnown RBP9.95□□□□□ -0.82
CAPN3-202ENST00000337571 SPACA6W5XKT8 324 aa9.95□□□□□ -0.82
CAPN3-202ENST00000337571 TACC2O95359 2948 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 USP27XA6NNY8 438 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 E9PLN8 166 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 EIF3HO15372 352 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 CDC40O60508 579 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 CCNT2O60583 730 aaKnown RBP9.94□□□□□ -0.82
CAPN3-202ENST00000337571 CTNSO60931 367 aa9.94□□□□□ -0.82
CAPN3-202ENST00000337571 SSTR1P30872 391 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms