RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 ZDHHC4Q9NPG8 344 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 MARK1Q9P0L2 795 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 CXXC1Q9P0U4 656 aaPredicted RBP15.67■□□□□ 0.1
SHQ1-201ENST00000325599 ATP6V1HQ9UI12 483 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 RNF6Q9Y252 685 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 PADI2Q9Y2J8 665 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 DYRK1BQ9Y463 629 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 PMF1-BGLAPU3KQ54 211 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 TNFRSF11BO00300 401 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 ZNF197O14709 1029 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 SLC5A12Q1EHB4 618 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 P2RY8Q86VZ1 359 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 RNF130Q86XS8 419 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 ZNF557Q8N988 423 aaPredicted RBP15.67■□□□□ 0.1
SHQ1-201ENST00000325599 OR7G1Q8NGA0 311 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 POF1BQ8WVV4 589 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 ARRDC3Q96B67 414 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 PITX2Q99697 317 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 BHLHE41Q9C0J9 482 aaPredicted RBP15.67■□□□□ 0.1
SHQ1-201ENST00000325599 CORO2BQ9UQ03 480 aa15.67■□□□□ 0.1
SHQ1-201ENST00000325599 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 C21orf33P30042 268 aaPredicted RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 NR4A2P43354 598 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 GPR1P46091 355 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 SLC6A11P48066 632 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 PPIGQ13427 754 aaKnown RBP eCLIP15.66■□□□□ 0.18e-7■■■□□ 14.9
SHQ1-201ENST00000325599 PROX2Q3B8N5 592 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 PRSS36Q5K4E3 855 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 FAM20CQ8IXL6 584 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 LRRC56Q8IYG6 542 aaPredicted RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 OR9A1PQ8NGU1 263 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 PPCDCQ96CD2 204 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 HRASLS5Q96KN8 279 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 SPATA9Q9BWV2 254 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 SGPP1Q9BX95 441 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 M0R3G1 203 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 VIPR2P41587 438 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 CDH12P55289 794 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 SCARB2Q14108 478 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 FAM83HQ6ZRV2 1179 aaPredicted RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 SUN5Q8TC36 379 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 PROX1Q92786 737 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 LRIG1Q96JA1 1093 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 ZNF300Q96RE9 604 aaPredicted RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 ZNF347Q96SE7 839 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 NIPSNAP1Q9BPW8 284 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 PNMA8BQ9ULN7 279 aaPredicted RBP15.66■□□□□ 0.1
SHQ1-201ENST00000325599 IRAK3Q9Y616 596 aa15.66■□□□□ 0.1
SHQ1-201ENST00000325599 E9PQ18 207 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 M0R129 80 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 POP7O75817 140 aaKnown RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 NADKO95544 446 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 PRIM2P49643 509 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 ST8SIA6P61647 398 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 TEAD4Q15561 434 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 LAS2Q8IYD9 372 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 NRSN1Q8IZ57 195 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 LILRB4Q8NHJ6 448 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SLC5A11Q8WWX8 675 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 REPS1Q96D71 796 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 MARCH7Q9H992 704 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 C1GALT1Q9NS00 363 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 OTOL1A6NHN0 477 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 ADH5P11766 374 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 C6P13671 934 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 POU2F1P14859 743 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 PRKACBP22694 351 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 ST13P50502 369 aaKnown RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 HTRA4P83105 476 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 IFITM2Q01629 132 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SPIBQ01892 262 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SYT16Q17RD7 645 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 GCNT6Q5T4J0 391 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 NXPE4Q6UWF7 544 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 PRSS48Q7RTY5 328 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 MMAAQ8IVH4 418 aaKnown RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 CCDC103Q8IW40 242 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SLC38A6Q8IZM9 456 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 OR10G2Q8NGC3 310 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 GOT1L1Q8NHS2 421 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 NUS1Q96E22 293 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 EFCAB11Q9BUY7 163 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 GABARAPL3Q9BY60 117 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 DOCK9Q9BZ29 2069 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 ALPK3Q96L96 1907 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 CLDN25C9JDP6 229 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 FOXE1O00358 373 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 KPNA4O00629 521 aaPredicted RBP15.65■□□□□ 0.1
SHQ1-201ENST00000325599 GPR37L1O60883 481 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 EFCAB14O75071 495 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 CTNNB1P35222 781 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SOAT1P35610 550 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 NUDT6P53370 316 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 OCA2Q04671 838 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 SELENBP1Q13228 472 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 EXOC3L2Q2M3D2 409 aa15.65■□□□□ 0.1
SHQ1-201ENST00000325599 FAM71E1Q6IPT2 247 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms