RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CROCCQ5TZA2 2017 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 FZD6O60353 706 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 HOXB2P14652 356 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF12P17014 697 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 PRLHRP49683 370 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 BTN3A2P78410 334 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 LRRC26Q2I0M4 334 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 EXOC3L2Q2M3D2 409 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 BRF2Q9HAW0 419 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 C5AR2Q9P296 337 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
PCDHB9-201ENST00000316105 TLR4O00206 839 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 PSMD11O00231 422 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 KLK8O60259 260 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 TMCC2O75069 709 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ALPPP05187 535 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 AGXTP21549 392 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ITGB7P26010 798 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF551Q7Z340 670 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 DCP2Q8IU60 420 aaKnown RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 CEPT1Q9Y6K0 416 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SAGP10523 405 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 CDKN2CP42773 168 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC6A11P48066 632 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 MXD1Q05195 221 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 RUNX3Q13761 415 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF829Q3KNS6 432 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 PIGXQ8TBF5 258 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 OR5P2Q8WZ92 322 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 PHF21AQ96BD5 680 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 AHCYL2Q96HN2 611 aaKnown RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 NPLQ9BXD5 320 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SFXN1Q9H9B4 322 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 WDR37Q9Y2I8 494 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 LOC285556D6RIA3 1793 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 NUDT14O95848 222 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 CA3P07451 260 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 EIF4EBP2Q13542 120 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 MOGQ16653 247 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 SPRED1Q7Z699 444 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 PEX5LQ8IYB4 626 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 MAPKAP1Q9BPZ7 522 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 EHD1Q9H4M9 534 aa12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 NUP214P35658 2090 aaPredicted RBP12.86□□□□□ -0.35
PCDHB9-201ENST00000316105 GRIA2P42262 883 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 IHHQ14623 411 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 DLEU7Q6UYE1 221 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 HMGN2P46Q86SG4 172 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 CNPPD1Q9BV87 410 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 POLR2J2Q9GZM3 115 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ADH1BP00325 375 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 COL9A2Q14055 689 aaPredicted RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 GGTA1PQ4G0N0 100 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 OR52N2Q8NGI0 321 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 FUNDC2Q9BWH2 189 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 LHPPQ9H008 270 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 GTF2A1LQ9UNN4 478 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 A0A1W2PQU0 124 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 B3GALT2O43825 422 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ALPLP05186 524 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 MATN1P21941 496 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 STX4Q12846 297 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 MADCAM1Q13477 382 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 CST6Q15828 149 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 CPZQ66K79 652 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF57Q68EA5 555 aaPredicted RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 DUS1LQ6P1R4 473 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 UNC5DQ6UXZ4 953 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 CCDC116Q8IYX3 515 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 GJD3Q8N144 294 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 KAT2AQ92830 837 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC22A18Q96BI1 424 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ART5Q96L15 291 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 SORBS1Q9BX66 1292 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms