RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LILRB5O75023 590 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 RECQL5O94762 991 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 FABP3P05413 133 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 CTSHP09668 335 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 CPEP16870 476 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 ITPKAP23677 461 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 MAPK1P28482 360 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 HNF1BP35680 557 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 NUDT1P36639 197 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 CD79BP40259 229 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 SEPHS1P49903 392 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 MNX1P50219 401 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 ARFIP1P53367 373 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 SRSF11Q05519 484 aaKnown RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 PPIGQ13427 754 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS50-202ENST00000305866 GPAT3Q53EU6 434 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 EOGTQ5NDL2 527 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 RNF219Q5W0B1 726 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 PAQR6Q6TCH4 344 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 TMEM107Q6UX40 140 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 CD300LDQ6UXZ3 194 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 ZNF765Q7L2R6 523 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 BPHLQ86WA6 291 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 SERPINA9Q86WD7 417 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 TMEM173Q86WV6 379 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 NRSN1Q8IZ57 195 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 ZNF557Q8N988 423 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 ZNF540Q8NDQ6 660 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 HUS1BQ8NHY5 278 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 GLMNQ92990 594 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 RNF166Q96A37 237 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 ZNF775Q96BV0 537 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 MTERF3Q96E29 417 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 ZHX1-C8orf76Q96EF9 292 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 KCNC2Q96PR1 638 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 OR52E6Q96RD3 313 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 UBL7Q96S82 380 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 MARVELD1Q9BSK0 173 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 SMURF1Q9HCE7 757 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 PAK6Q9NQU5 681 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 ABCB10Q9NRK6 738 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 PDP1Q9P0J1 537 aaPredicted RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 SAMD4AQ9UPU9 718 aaKnown RBP5.21□□□□□ -1.58
VPS50-202ENST00000305866 SH2B3Q9UQQ2 575 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 PCDHB11Q9Y5F2 797 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 IRAK3Q9Y616 596 aa5.21□□□□□ -1.58
VPS50-202ENST00000305866 RANBP2P49792 3224 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 PRR19A6NJB7 356 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 GABRR3A8MPY1 467 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 RNASET2O00584 256 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 DVL2O14641 736 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PCDH17O14917 1159 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ZW10O43264 779 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 CLDN9O95484 217 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 RPLP0P05388 317 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 IGFBP1P08833 259 aaPredicted RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 PRKAR2AP13861 404 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 ENGP17813 658 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PRPS1L1P21108 318 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PPIBP23284 216 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 DDX6P26196 483 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS50-202ENST00000305866 SOX18P35713 384 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 RGS4P49798 205 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 GZMKP49863 264 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ST13P50502 369 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 RPS24P62847 133 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 ABATP80404 500 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 IL5RAQ01344 420 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 MLC1Q15049 377 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PLA1AQ53H76 456 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 CEP78Q5JTW2 689 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ARMC12Q5T9G4 340 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ERAP2Q6P179 960 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 CRTC1Q6UUV9 634 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 GCNT7Q6ZNI0 430 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 TMEM91Q6ZNR0 172 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 TECPR1Q7Z6L1 1165 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SLC30A8Q8IWU4 369 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PHC2Q8IXK0 858 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PLA2G15Q8NCC3 412 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 METTL6Q8TCB7 284 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 B3GALT6Q96L58 329 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 COL21A1Q96P44 957 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 COPS4Q9BT78 406 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PRR14Q9BWN1 585 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 RACGAP1Q9H0H5 632 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ING2Q9H160 280 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SARS2Q9NP81 518 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 ANKRD10Q9NXR5 420 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 KLF15Q9UIH9 416 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ZNF490Q9ULM2 529 aaPredicted RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 VPS4AQ9UN37 437 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 CORO2BQ9UQ03 480 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 YIPF1Q9Y548 306 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PCDHB7Q9Y5E2 793 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 GMPPBQ9Y5P6 360 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 NPTNQ9Y639 398 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 A0A0G2JK05 382 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 A0A1W2PQ09 198 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SLC5A10A0PJK1 596 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms