RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 UNC5CO95185 931 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 FKBP9O95302 570 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HSD3B1P14060 373 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HRH2P25021 359 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HSD3B2P26439 372 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 EPHA3P29320 983 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 SCTRP47872 440 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 ABATP80404 500 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 PRKG2Q13237 762 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 RAPSNQ13702 412 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 GPR19Q15760 415 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HIST2H2ACQ16777 129 aaPredicted RBP19.99■□□□□ 0.79
SMCO4-201ENST00000298966 GLIPR1L2Q4G1C9 344 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 XKR6Q5GH73 641 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 THEMIS2Q5TEJ8 643 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 HIST2H2AA3Q6FI13 130 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 DUS1LQ6P1R4 473 aaKnown RBP19.99■□□□□ 0.79
SMCO4-201ENST00000298966 LARP4Q71RC2 724 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMCO4-201ENST00000298966 TRIM46Q7Z4K8 759 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 ZNF501Q96CX3 271 aaPredicted RBP19.99■□□□□ 0.79
SMCO4-201ENST00000298966 CDK15Q96Q40 435 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 KCNA7Q96RP8 456 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 CCDC106Q9BWC9 280 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 ELOVL6Q9H5J4 265 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 B3GNT3Q9Y2A9 372 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 RNF11Q9Y3C5 154 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 TIMM22Q9Y584 194 aa19.99■□□□□ 0.79
SMCO4-201ENST00000298966 APCP25054 2843 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 A0A1B0GTL3 188 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 NPIPB8E9PQR5 432 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 ZBTB11O95625 1053 aaPredicted RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 LBPP18428 481 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 ATP4BP51164 291 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 NAA25Q14CX7 972 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 NXNQ6DKJ4 435 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 SLCO4C1Q6ZQN7 724 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 CHSY3Q70JA7 882 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 SPATA19Q7Z5L4 167 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 C17orf64Q86WR6 236 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 MYLK4Q86YV6 388 aaPredicted RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 DSELQ8IZU8 1212 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 CPSF7Q8N684 471 aaKnown RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 SLC38A9Q8NBW4 561 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 PPFIBP2Q8ND30 876 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 MARVELD3Q96A59 401 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 METTL2AQ96IZ6 378 aaKnown RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 PPP3R2Q96LZ3 170 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 TUBB1Q9H4B7 451 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 TMEM45AQ9NWC5 275 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 ADGRE2Q9UHX3 823 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 COPG1Q9Y678 874 aaKnown RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 OTOGQ6ZRI0 2925 aa19.98■□□□□ 0.79
SMCO4-201ENST00000298966 MDC1Q14676 2089 aaKnown RBP19.98■□□□□ 0.79
SMCO4-201ENST00000298966 E7EQ34 232 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 E9PBE3 544 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 MANBAO00462 879 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 KLHL41O60662 606 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 PRR35P0CG20 571 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 C1GALT1C1LP0DN25 315 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 T-ENOLP0DO92 83 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 SERPINB1P30740 379 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 CORO7P57737 925 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 NCALDP61601 193 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 MAD2L1Q13257 205 aaPredicted RBP19.97■□□□□ 0.79
SMCO4-201ENST00000298966 DOC2AQ14183 400 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 FRG2Q64ET8 278 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 NXPE4Q6UWF7 544 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 AMIGO1Q86WK6 493 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 OOSP2Q86WS3 158 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 RAB43Q86YS6 212 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 KRT78Q8N1N4 520 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 LCN9Q8WX39 176 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 NEIL2Q969S2 332 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 TUBGCP3Q96CW5 907 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 CLIP3Q96DZ5 547 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 NSL1Q96IY1 281 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 FRG2BQ96QU4 278 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 ZNF385DQ9H6B1 395 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 FANCEQ9HB96 536 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 HRASLS2Q9NWW9 162 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 SOHLH2Q9NX45 425 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 ICKQ9UPZ9 632 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 RRP15Q9Y3B9 282 aaKnown RBP19.97■□□□□ 0.79
SMCO4-201ENST00000298966 F8P00451 2351 aa19.97■□□□□ 0.79
SMCO4-201ENST00000298966 KRT87PA6NCN2 255 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 OR5K3A6NET4 321 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 UBDO15205 165 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 ALPPP05187 535 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 NCF2P19878 526 aaPredicted RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 PRPH2P23942 346 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 MRPL19P49406 292 aaKnown RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 RASSF2P50749 326 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 PER3P56645 1201 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 PHEXP78562 749 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 ACTN3Q08043 901 aaPredicted RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 CSTF3Q12996 717 aaKnown RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 ATP1A4Q13733 1029 aa19.96■□□□□ 0.79
SMCO4-201ENST00000298966 FASTKQ14296 549 aaKnown RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 ZRSR2Q15696 482 aaKnown RBP19.96■□□□□ 0.79
SMCO4-201ENST00000298966 CPSF6Q16630 551 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms