RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 WNT7BP56706 349 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 NCS1P62166 190 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 COL28A1Q2UY09 1125 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 CHST4Q8NCG5 386 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 ATP6V1C2Q8NEY4 427 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 ING5Q8WYH8 240 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 DNASE1L2Q92874 299 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 TMEM203Q969S6 136 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 ACOT13Q9NPJ3 140 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 PCDHGA4Q9Y5G9 962 aa16.9■□□□□ 0.3
PCDHA13-201ENST00000289272 PCDH17O14917 1159 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC16A5O15375 505 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 PCDHGA12O60330 932 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 HMGCS1Q01581 520 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 FN3KQ9H479 309 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 TAS2R8Q9NYW2 309 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 NUFIP1Q9UHK0 495 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ZNF670-ZNF695F2Z2N8 137 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 LYRM1O43325 122 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 RHCEP18577 417 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 RPS24P62847 133 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 E2F1Q01094 437 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 POU4F2Q12837 409 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 COQ8AQ8NI60 647 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 MUL1Q969V5 352 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 TXNDC15Q96J42 360 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 OR4K3Q96R72 315 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 MRI1Q9BV20 369 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 DPCDQ9BVM2 203 aaPredicted RBP16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 FBRSL1Q9HCM7 1045 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 FAM170BA6NMN3 283 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 RENP00797 406 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ADAP00813 363 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 BMP1P13497 986 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 CCL5P13501 91 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 CHMP24386 653 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 GRK6P43250 576 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 GPM6BQ13491 265 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 NTRK2Q16620 822 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 METTL2BQ6P1Q9 378 aaKnown RBP16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ARL9Q6T311 187 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC44A3Q8N4M1 653 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 C16orf70Q9BSU1 422 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 MYNNQ9NPC7 610 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 PCDHB16Q9NRJ7 776 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 SACM1LQ9NTJ5 587 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ACSL5Q9ULC5 683 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 LRRC14BA6NHZ5 514 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 NIPSNAP2O75323 286 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ATE1O95260 518 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 BLKP51451 505 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ARF5P84085 180 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 TRAM2Q15035 370 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 CARD16Q5EG05 197 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ZDHHC14Q8IZN3 488 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 NFKBIDQ8NI38 313 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 BBS10Q8TAM1 723 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 NELL2Q99435 816 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 PFDN5Q99471 154 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 SORT1Q99523 831 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 ABCG5Q9H222 651 aa16.89■□□□□ 0.29
PCDHA13-201ENST00000289272 OR2AG2A6NM03 316 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 RGS9O75916 674 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 PGDP52209 483 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 ADGRG5Q8IZF4 528 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 OR56A1Q8NGH5 318 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SAMD11Q96NU1 681 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC2A13Q96QE2 648 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 GORASP2Q9H8Y8 452 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 CNOT2Q9NZN8 540 aaKnown RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 PVALBP20472 110 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SERINC3Q13530 473 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 IQCF2Q8IXL9 164 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 OR14C36Q8NHC7 312 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 HERVK_113Q902F9 699 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 EPYCQ99645 322 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 FOXD2O60548 495 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 EDNRAP25101 427 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 HSPB3Q12988 150 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SNTA1Q13424 505 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 METAP1DQ6UB28 335 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 WDR53Q7Z5U6 358 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SPRED1Q7Z699 444 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 OR5T2Q8NGG2 359 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 FCRL3Q96P31 734 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 SLC29A1Q99808 456 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 CDADC1Q9BWV3 514 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 BCL2L14Q9BZR8 327 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 TMEM168Q9H0V1 697 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 OR51V1Q9H2C8 321 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 CHMP1AQ9HD42 196 aaPredicted RBP16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 RB1P06400 928 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 AKT2P31751 481 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 CAPZA1P52907 286 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 PON2Q15165 354 aa16.88■□□□□ 0.29
PCDHA13-201ENST00000289272 TBCEQ15813 527 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms