RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 EBF1Q9UH73 591 aa18.4■□□□□ 0.54
BRAF-201ENST00000288602 CDC14AQ9UNH5 594 aa18.4■□□□□ 0.54
BRAF-201ENST00000288602 KLHL20Q9Y2M5 609 aa18.4■□□□□ 0.54
BRAF-201ENST00000288602 TSC22D4Q9Y3Q8 395 aa18.4■□□□□ 0.54
BRAF-201ENST00000288602 WASHC1A8K0Z3 465 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 TMPRSS11DO60235 418 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 CXCR2P25025 360 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 HSD17B2P37059 387 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 DMPKQ09013 629 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 SCARB2Q14108 478 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 WASH2PQ6VEQ5 465 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 OR52N2Q8NGI0 321 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 ZFAND2BQ8WV99 257 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 ADPRHL2Q9NX46 363 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 PNMA8BQ9ULN7 279 aaPredicted RBP18.39■□□□□ 0.53
BRAF-201ENST00000288602 ORC6Q9Y5N6 252 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 EPHA2P29317 976 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 HLCSP50747 726 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 RAB28P51157 221 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 ARHGDIAP52565 204 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 ESRRGP62508 458 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 TFF2Q03403 129 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 RAPSNQ13702 412 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 GCNT6Q5T4J0 391 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 LAIR2Q6ISS4 152 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 UBE3DQ7Z6J8 389 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 TSEN54Q7Z6J9 526 aaKnown RBP18.39■□□□□ 0.53
BRAF-201ENST00000288602 CHDHQ8NE62 594 aaPredicted RBP18.39■□□□□ 0.53
BRAF-201ENST00000288602 ADAMTS16Q8TE57 1224 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 GABRG3Q99928 467 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 DOHHQ9BU89 302 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 VCX3AQ9NNX9 186 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 TEX10Q9NXF1 929 aaPredicted RBP18.39■□□□□ 0.53
BRAF-201ENST00000288602 SPATA7Q9P0W8 599 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 ZNF451Q9Y4E5 1061 aa18.39■□□□□ 0.53
BRAF-201ENST00000288602 GPR89AB7ZAQ6 455 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 GPR89BP0CG08 455 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 CRHBPP24387 322 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 DNAJA1P31689 397 aaKnown RBP18.38■□□□□ 0.53
BRAF-201ENST00000288602 RPL3P39023 403 aaKnown RBP18.38■□□□□ 0.53
BRAF-201ENST00000288602 LRRC74AQ0VAA2 488 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 RAB39AQ14964 217 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 KIAA1161Q6NSJ0 714 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 SMYD1Q8NB12 490 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 CNIH3Q8TBE1 160 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 EXOSC8Q96B26 276 aaKnown RBP18.38■□□□□ 0.53
BRAF-201ENST00000288602 C17orf62Q9BQA9 187 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 SPATA9Q9BWV2 254 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 PCBD2Q9H0N5 130 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 KLHL31Q9H511 634 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 RUBCNLQ9H714 662 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 THUMPD1Q9NXG2 353 aaKnown RBP18.38■□□□□ 0.53
BRAF-201ENST00000288602 GMEB1Q9Y692 573 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 M0QX08 132 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 EML2O95834 649 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 DDCP20711 480 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 RRM2P31350 389 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 ISL1P61371 349 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 SELENOWP63302 87 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 PRDX1Q06830 199 aaKnown RBP18.38■□□□□ 0.53
BRAF-201ENST00000288602 EPS8Q12929 822 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 HSPB3Q12988 150 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 TAMM41Q96BW9 452 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 TIMM29Q9BSF4 260 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 AICDAQ9GZX7 198 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 REEP1Q9H902 201 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 TMEM184CQ9NVA4 438 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 ICKQ9UPZ9 632 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 TESMINQ9Y4I5 508 aa18.38■□□□□ 0.53
BRAF-201ENST00000288602 CCDC88CQ9P219 2028 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 TRBV23OR9-2A0A075B6M9 112 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 CAPN5O15484 640 aaPredicted RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 NDUFS4O43181 175 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 PRKRAO75569 313 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 AK4P27144 223 aaPredicted RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 CDK9P50750 372 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 RPS6KA3P51812 740 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 RAD23AP54725 363 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 TEAD4Q15561 434 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 ZBED5Q49AG3 693 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 C6orf141Q5SZD1 244 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 IKBIPQ70UQ0 350 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 PIK3C3Q8NEB9 887 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 POP5Q969H6 163 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 MTERF3Q96E29 417 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 SIPA1Q96FS4 1042 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 PDXPQ96GD0 296 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 RIPOR3Q96MK2 946 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 SPHK1Q9NYA1 384 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 CACNB4O00305 520 aaPredicted RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 BCKDKO14874 412 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 FPR1P21462 350 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 PTGER1P34995 402 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 MAPK10P53779 464 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 MANFP55145 182 aaKnown RBP18.37■□□□□ 0.53
BRAF-201ENST00000288602 ITGA1P56199 1179 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 IL5RAQ01344 420 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 TPRG1LQ5T0D9 272 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 ZNF691Q5VV52 312 aa18.37■□□□□ 0.53
BRAF-201ENST00000288602 KDM4DQ6B0I6 523 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms