RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SEMA3DO95025 777 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 PRLP01236 227 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 CYP4B1P13584 511 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 PRKCAP17252 672 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 HLA-FP30511 346 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 MC4RP32245 332 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 HNF4AP41235 474 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 SLC19A1P41440 591 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 RGS4P49798 205 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 NKX2-5P52952 324 aaPredicted RBP9.91□□□□□ -0.82
UPF3B-201ENST00000276201 CACNG1Q06432 222 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 GTF2H3Q13889 308 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 DMC1Q14565 340 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 SYT16Q17RD7 645 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 TMEM215Q68D42 235 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 NUDT18Q6ZVK8 323 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 CIR1Q86X95 450 aaPredicted RBP9.91□□□□□ -0.82
UPF3B-201ENST00000276201 KRT73Q86Y46 540 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 RAB43Q86YS6 212 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 C10orf111Q8N326 155 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 KRTCAP2Q8N6L1 136 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 ESAMQ96AP7 390 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 CMTM7Q96FZ5 175 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 LMLNQ96KR4 655 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 C7orf34Q96L11 122 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 MAGEB10Q96LZ2 347 aaPredicted RBP9.91□□□□□ -0.82
UPF3B-201ENST00000276201 PHOX2BQ99453 314 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 DIABLOQ9NR28 239 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 ABCB8Q9NUT2 735 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 THUMPD1Q9NXG2 353 aaKnown RBP9.91□□□□□ -0.82
UPF3B-201ENST00000276201 KLHL42Q9P2K6 505 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 MMP17Q9ULZ9 603 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 BTBD3Q9Y2F9 522 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 R4GN57 208 aa9.91□□□□□ -0.82
UPF3B-201ENST00000276201 E5RI56 91 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 INSIG1O15503 277 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 TRIM3O75382 744 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ABCB1P08183 1280 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ADORA3P0DMS8 318 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 GRK5P34947 590 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 VLDLRP98155 873 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 DUOXA1Q1HG43 343 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 YIF1BQ5BJH7 314 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 C10orf62Q5T681 223 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 OR4F3Q6IEY1 312 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF551Q7Z340 670 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 KIAA0907Q7Z7F0 614 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 NLGN4XQ8N0W4 816 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ATG16L2Q8NAA4 619 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 NUDT8Q8WV74 236 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 GON7Q9BXV9 100 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 SYNDIG1Q9H7V2 258 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 DYRK4Q9NR20 520 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 LATS2Q9NRM7 1088 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ELOVL2Q9NXB9 296 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF490Q9ULM2 529 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 POFUT2Q9Y2G5 429 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 FANCMQ8IYD8 2048 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 KCNK5O95279 499 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 YES1P07947 543 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 PIPP12273 146 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ANXA8P13928 327 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 CTPS1P17812 591 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 PPIBP23284 216 aaKnown RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 HOXA6P31267 233 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 CD70P32970 193 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ACVRL1P37023 503 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 FNTBP49356 437 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 PLIN5Q00G26 463 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 CSTF3Q12996 717 aaKnown RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ARMCX4Q5H9R4 360 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 RNLSQ5VYX0 342 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 LRRC66Q68CR7 880 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 XKRXQ6PP77 449 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF517Q6ZMY9 492 aaPredicted RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 FIBINQ8TAL6 211 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 SORCS1Q8WY21 1168 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 TRNT1Q96Q11 434 aaKnown RBP9.9□□□□□ -0.82
UPF3B-201ENST00000276201 TAPBPLQ9BX59 468 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 CLPBQ9H078 707 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ZSCAN32Q9NX65 697 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 SIRT5Q9NXA8 310 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 TAS2R9Q9NYW1 312 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 ENOPH1Q9UHY7 261 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 PCDHGA2Q9Y5H1 932 aa9.9□□□□□ -0.82
UPF3B-201ENST00000276201 EFCAB10A6NFE3 127 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MYO1GB0I1T2 1018 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 NDUFB5O43674 189 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 KDELR3O43731 214 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MPZL2O60487 215 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF682O95780 498 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MYCLP1P12525 358 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 DGKAP23743 735 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 EPHA2P29317 976 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms