RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 SSR3Q9UNL2 185 aa12.71□□□□□ -0.38
SNX25-201ENST00000264694 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.38
SNX25-201ENST00000264694 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
SNX25-201ENST00000264694 GNG14A0A1W2PPG7 69 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 ARHGEF9O43307 516 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 BNIP3LO60238 219 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FZD6O60353 706 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 DPM1O60762 260 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ANXA4P09525 319 aaPredicted RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 APEX1P27695 318 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 PRIM2P49643 509 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 SCARB2Q14108 478 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.7□□□□□ -0.381e-6■■□□□ 14.4
SNX25-201ENST00000264694 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 TOR1AIP1Q5JTV8 583 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FRMPD2BQ6IN97 320 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 SDE2Q6IQ49 451 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 PLET1Q6UQ28 207 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FAM83DQ9H4H8 585 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 DNAJC11Q9NVH1 559 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 FTSJ1Q9UET6 329 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 TMPRSS11EQ9UL52 423 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 SNX11Q9Y5W9 270 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ALG5Q9Y673 324 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 C2orf78A6NCI8 922 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 IGHA2P01877 340 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ALPPP05187 535 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 CYP4F8P98187 520 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 UBE3AQ05086 875 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ZNF385BQ569K4 471 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 FAM180BQ6P0A1 224 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 MACC1Q6ZN28 852 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 CCDC28AQ8IWP9 274 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 MKRN2Q9H000 416 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 STUB1Q9UNE7 303 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 LSM2Q9Y333 95 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 ZAR1LA6NP61 321 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 H3BN98 237 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 TLR4O00206 839 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 TEX28O15482 410 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 SMAD6O43541 496 aaKnown RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 MTX2O75431 263 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 ARHGEF15O94989 841 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 CSTF2P33240 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNX25-201ENST00000264694 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
SNX25-201ENST00000264694 GPR19Q15760 415 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FAM20CQ8IXL6 584 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 L3MBTL4Q8NA19 623 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 GPR26Q8NDV2 337 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 FOXJ1Q92949 421 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 GON7Q9BXV9 100 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 COQ3Q9NZJ6 369 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 COMMD3Q9UBI1 195 aa12.7□□□□□ -0.38
SNX25-201ENST00000264694 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 SCO1O75880 301 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 OR2B3O76000 313 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 C1SP09871 688 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 CYP2A6P11509 494 aaPredicted RBP12.69□□□□□ -0.38
SNX25-201ENST00000264694 PRPH2P23942 346 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 ERP29P30040 261 aaKnown RBP12.69□□□□□ -0.38
SNX25-201ENST00000264694 SDC2P34741 201 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 GZMKP49863 264 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 HBA1P69905 142 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 MGAT3Q09327 533 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 C19orf57Q0VDD7 668 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 GGTA1PQ4G0N0 100 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 NATD1Q8N6N6 113 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 HJURPQ8NCD3 748 aaPredicted RBP12.69□□□□□ -0.38
SNX25-201ENST00000264694 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 NACC2Q96BF6 587 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 HDHD5Q9BXW7 423 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 TRBV4-1A0A0J9YWV2 114 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 A0A1B0GVM2 712 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 HYKKA2RU49 373 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 MGAT4DA6NG13 374 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 E7EQ34 232 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 C6orf47O95873 294 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 MSL3P1P0C860 447 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNX25-201ENST00000264694 TEAD4Q15561 434 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 LRRC73Q5JTD7 316 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 FAM46DQ8NEK8 389 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 CREB3L4Q8TEY5 395 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 KLHL6Q8WZ60 621 aa12.69□□□□□ -0.38
SNX25-201ENST00000264694 WDFY2Q96P53 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms