RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 LAMP1P11279 417 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 ATF4P18848 351 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 POU1F1P28069 291 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 SLC6A4P31645 630 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 CNR2P34972 360 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 HMGCLP35914 325 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 SNTA1Q13424 505 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 BOP1Q14137 746 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 RGNQ15493 299 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 C9orf131Q5VYM1 1079 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 C19orf18Q8NEA5 215 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 OR4M2Q8NGB6 313 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 OR8H1Q8NGG4 311 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 ZC3HAV1LQ96H79 300 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 KCNN2Q9H2S1 579 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 MCUBQ9NWR8 336 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 TRPV2Q9Y5S1 764 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 CLCA3PQ9Y6N3 262 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 GREB1Q4ZG55 1949 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 J3KTA2 159 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 MYL12BO14950 172 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 KCNJ13O60928 360 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 IGHA2P01877 340 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 PDGFAP04085 211 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 MYL12AP19105 171 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 DSTNP60981 165 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 RRAS2P62070 204 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 RPS24P62847 133 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 RING1Q06587 406 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 TAF10Q12962 218 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 MRPL28Q13084 256 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 GGTA1PQ4G0N0 100 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 DGKKQ5KSL6 1271 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 SPRYD7Q5W111 196 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 MZT2BQ6NZ67 158 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 HSDL2Q6YN16 418 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 NAGSQ8N159 534 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 TTC9BQ8N6N2 239 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 CLDN22Q8N7P3 220 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 NPLOC4Q8TAT6 608 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 IL4I1Q96RQ9 567 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 DUSP26Q9BV47 211 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 POLR2J2Q9GZM3 115 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 RBFOX1Q9NWB1 397 aaKnown RBP14.36□□□□□ -0.11
XRCC1-201ENST00000262887 ENOPH1Q9UHY7 261 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 CORO2BQ9UQ03 480 aa14.36□□□□□ -0.11
XRCC1-201ENST00000262887 TRAV19A0A0A6YYK7 116 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ZAR1LA6NP61 321 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 WASHC1A8K0Z3 465 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 SLC9A3R1O14745 358 aaPredicted RBP14.35□□□□□ -0.11
XRCC1-201ENST00000262887 PCDH17O14917 1159 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 PCDH7O60245 1069 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 PRMT3O60678 531 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TPST2O60704 377 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ENTPD6O75354 484 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TNFRSF21O75509 655 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ALPIP09923 528 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 CLEC2LP0C7M8 214 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 DGKEP52429 567 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TRIQKQ629K1 86 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 FRG2Q64ET8 278 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ATP6V1C2Q8NEY4 427 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 GTF3C2Q8WUA4 911 aaPredicted RBP14.35□□□□□ -0.11
XRCC1-201ENST00000262887 FRG2BQ96QU4 278 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 PLD2O14939 933 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 RHOCP08134 193 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ICAM2P13598 275 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ACPPP15309 386 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 MAN2A2P49641 1150 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 WSCD2Q2TBF2 565 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 CYP27C1Q4G0S4 372 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 ZBTB37Q5TC79 503 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 AQP11Q8NBQ7 271 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 DUSP18Q8NEJ0 188 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 KLHL6Q8WZ60 621 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TMEM80Q96HE8 168 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 HYLS1Q96M11 299 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 SLC25A19Q9HC21 320 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 TXNL4BQ9NX01 149 aaKnown RBP14.35□□□□□ -0.11
XRCC1-201ENST00000262887 FTSJ1Q9UET6 329 aa14.35□□□□□ -0.11
XRCC1-201ENST00000262887 FAM240BA0A1B0GVZ2 78 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 LINC00862A6NCI5 91 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 BET1O15155 118 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 HCN1O60741 890 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 TRBC1P01850 177 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PRKAR1AP10644 381 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 SLC2A2P11168 524 aaPredicted RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 PPIBP23284 216 aaKnown RBP14.34□□□□□ -0.11
XRCC1-201ENST00000262887 WEE1P30291 646 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 CRATP43155 626 aa14.34□□□□□ -0.11
XRCC1-201ENST00000262887 CRISP1P54107 249 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms