RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CMTM7Q96FZ5 175 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC30A2Q9BRI3 323 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 AIFM2Q9BRQ8 373 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TRIM45Q9H8W5 580 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 GLTPQ9NZD2 209 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 KMT2EQ8IZD2 1858 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CDH23Q9H251 3354 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAGEB17A8MXT2 336 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLOD3O60568 738 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZNF780AO75290 641 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PDGFAP04085 211 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PKLRP30613 574 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CD70P32970 193 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 EVI2BP34910 448 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 GRK5P34947 590 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 CAMK2GQ13555 558 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 FRG2Q64ET8 278 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMPRSS11AQ6ZMR5 421 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 RNF180Q86T96 592 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 LACC1Q8IV20 430 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 FBXL6Q8N531 539 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 DCAF4L2Q8NA75 395 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 VANGL1Q8TAA9 524 aaPredicted RBP9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 NELL1Q92832 810 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 FRG2BQ96QU4 278 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 COPS8Q99627 209 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 ITPAQ9BY32 194 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 AP3M1Q9Y2T2 418 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PEX16Q9Y5Y5 336 aa9.03□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLXNB3Q9ULL4 1909 aa9.02□□□□□ -0.96
HLA-DOA-201ENST00000229829 OR2A25A4D2G3 310 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 AGAP14A8MT82 685 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM229AB2RXF0 380 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 M0R082 166 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 MTRF1O75570 445 aaKnown RBP9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 OPN1SWP03999 348 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 MSL3P1P0C860 447 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 COX7A2P14406 83 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPX2P18283 190 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC19A1P41440 591 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC6A12P48065 614 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SMSP52788 366 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 CRISP3P54108 245 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 CXCR4P61073 352 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF45Q02386 682 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF284Q2VY69 593 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR33Q49SQ1 333 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ESCO2Q56NI9 601 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 IDO2Q6ZQW0 420 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 CBLL1Q75N03 491 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 TSEN54Q7Z6J9 526 aaKnown RBP9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR52J3Q8NH60 311 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC7A6Q92536 515 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC38A4Q969I6 547 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 C7orf34Q96L11 122 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC12A9Q9BXP2 914 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SAV1Q9H4B6 383 aaPredicted RBP9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 REEP1Q9H902 201 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 PCDHGA6Q9Y5G7 932 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 H3BM21 787 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 WWP2O00308 870 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ETHE1O95571 254 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 MTAPQ13126 283 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM122CQ6P4D5 195 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRSS48Q7RTY5 328 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM124AQ86V42 546 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 DNAJB8Q8NHS0 232 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ASB11Q8WXH4 323 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 MYLIPQ8WY64 445 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 COQ8BQ96D53 544 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMCO6Q96DC7 493 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SMAD5Q99717 465 aaKnown RBP9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 C1QTNF6Q9BXI9 259 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 TPT1P8Q9HAU6 139 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLAMF7Q9NQ25 335 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZDHHC3Q9NYG2 299 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 ATPIF1Q9UII2 106 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 OSGIN1Q9UJX0 560 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC6A14Q9UN76 642 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 YIPF1Q9Y548 306 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 LYVE1Q9Y5Y7 322 aa9.02□□□□□ -0.97
HLA-DOA-201ENST00000229829 KIAA0513O60268 411 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 RPLP0P05388 317 aaKnown RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HIST1H2AGP0C0S8 130 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TSPAN19P0C672 248 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 TNNI3P19429 210 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HIST1H2ADP20671 130 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 POU1F1P28069 291 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR1E2P47887 323 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 PFN3P60673 137 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 HOXC5Q00444 222 aa9.01□□□□□ -0.97
HLA-DOA-201ENST00000229829 LMAN2Q12907 356 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms