RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Nedd4lQ8CFI0 1004 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ddx52Q8K301 598 aaKnown RBP11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fndc5Q8K4Z2 209 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 As3mtQ91WU5 376 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ddx28Q9CWT6 540 aaKnown RBP11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Maf1Q9D0U6 258 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Uqcrc2Q9DB77 453 aaKnown RBP11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Wdr53Q9DB94 358 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mettl15Q9DCL4 406 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sacm1lQ9EP69 587 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Panx1Q9JIP4 426 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Acot2Q9QYR9 453 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 FarsbQ9WUA2 589 aaKnown RBP11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm7173A0A0G2JEB6 3132 aa11.13□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Klhl3E0CZ16 587 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn1r77E9PY60 306 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 E9Q0B3 247 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn2r116E9Q6I0 856 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm7945F6QI24 236 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn1r176G3UW31 304 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm21915J3QPM7 133 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dgcr6O35347 198 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Foxq1O70220 400 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Clcn7O70496 803 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 P01679 107 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mup4P11590 178 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Serpine1P22777 402 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ido1P28776 407 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sox3P53784 375 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ap1s1P61967 158 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ica1P97411 478 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sox14Q04892 240 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc37a3Q3TIT8 494 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zc3h12aQ5D1E7 596 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Bfsp2Q6NVD9 416 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Znf503Q7TMA2 652 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Syt16Q7TN83 639 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 ZfatQ7TS63 1237 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Txnl4bQ8BUH1 149 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr622Q8VGY7 317 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AjubaQ91XC0 547 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cstf3Q99LI7 717 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fam32aQ9CR80 112 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Bcl7aQ9CXE2 210 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rpn2Q9DBG6 631 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Creb3l1Q9Z125 519 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tsc22d3Q9Z2S7 137 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Plin4O88492 1403 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn2r7E9PYL5 915 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tsga10ipF7A1F0 157 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm17174M0QWQ9 212 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gon7P0C8B4 98 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sox6P40645 827 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Bcl6P41183 707 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Yap1P46938 488 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ppm1aP49443 382 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 CntfP51642 198 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Col6a2Q02788 1034 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Prelid2Q0VBB0 177 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 MlanaQ2TA50 113 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 CdonQ32MD9 1250 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 OclnQ61146 521 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Lemd2Q6DVA0 511 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Myl12aQ6ZWQ9 172 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1152Q7TR34 310 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1051Q7TR76 308 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zc3hav1lQ8BFR1 296 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fbxl4Q8BH70 621 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Nlgn3Q8BYM5 825 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slitrk6Q8C110 840 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tnfrsf12aQ9CR75 129 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 5530401A14RikQ9D3H9 131 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Serpini2Q9JK88 405 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Acsl4Q9QUJ7 711 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 PnckQ9QYK9 343 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc35a2Q9R0M8 390 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Adam25Q9R159 760 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 TesminQ9WTJ6 475 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Plce1Q8K4S1 2282 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tsc22d2E9Q7M2 769 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr171G5E8J1 314 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Pld3O35405 488 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 HpnO35453 436 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rgs7O54829 469 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mybpc3O70468 1270 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 TP20293 436 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gbx2P48031 348 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 DsppP97399 934 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cab39Q06138 341 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr735Q7TRM4 354 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Proser3Q7TSA6 634 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 PxkQ8BX57 582 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc41a2Q8BYR8 573 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vps9d1Q8C190 649 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mettl3Q8C3P7 580 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tma7Q8K003 64 aaKnown RBP11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Adgrg1Q8K209 687 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 FevQ8QZW2 237 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1469Q8VFW5 309 aa11.12□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1414Q8VGU5 312 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms