RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 CARFQ8N187 725 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 RNF175Q8N4F7 328 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 ANKRD53Q8N9V6 530 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 MFSD9Q8NBP5 474 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 OR4D9Q8NGE8 314 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 HUS1BQ8NHY5 278 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 WDR20Q8TBZ3 569 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 MTFMTQ96DP5 389 aaKnown RBP8.95□□□□□ -0.98
PHGDH-228ENST00000641847 CCDC74BQ96LY2 380 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 ZFYVE21Q9BQ24 234 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 ELAC2Q9BQ52 826 aaKnown RBP8.95□□□□□ -0.98
PHGDH-228ENST00000641847 ZPBPQ9BS86 351 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 TMEM120AQ9BXJ8 343 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 TUBB1Q9H4B7 451 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF768Q9H5H4 540 aaKnown RBP8.95□□□□□ -0.98
PHGDH-228ENST00000641847 SYNPO2LQ9H987 977 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 DMRT3Q9NQL9 472 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 KLHL14Q9P2G3 628 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 DCTN4Q9UJW0 460 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 B3GALT1Q9Y5Z6 326 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 HEATR5BQ9P2D3 2071 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 AKAP9Q99996 3911 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 APCP25054 2843 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 UNC13CQ8NB66 2214 aa8.95□□□□□ -0.98
PHGDH-228ENST00000641847 GOLGA8QA0A0J9YX86 632 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 IGHV5-10-1A0A0J9YXX1 117 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 GOLGA8OA6NCC3 632 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ANKDD1BA6NHY2 528 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 A8MU76 341 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 GOLGA8NF8WBI6 632 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SLC28A1O00337 649 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SDHDO14521 159 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TOX3O15405 576 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 NDUFS4O43181 175 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 MAP3K7O43318 606 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 LCMT2O60294 686 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 CTSVO60911 334 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 STATHP02808 62 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SERPIND1P05546 499 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ANKRD34CP0C6C1 535 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 LINC00032P0C843 101 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 GSTM2P28161 218 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 PIK3CBP42338 1070 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ARL4DP49703 201 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SEPHS1P49903 392 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 IDH3AP50213 366 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ARFIP2P53365 341 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 RPS13P62277 151 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ABHD18Q0P651 414 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 CSTF3Q12996 717 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 DEFB110Q30KQ9 67 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SLC9B1Q4ZJI4 515 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 XKR7Q5GH72 579 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 EPGNQ6UW88 154 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TIPARPQ7Z3E1 657 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ASPGQ86U10 573 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 RCBTB1Q8NDN9 531 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TTLQ8NG68 377 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 OR2T11Q8NH01 316 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ZNF473Q8WTR7 871 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 C10orf82Q8WW14 230 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 STARD8Q92502 1023 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 THAP11Q96EK4 314 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 FCRL4Q96PJ5 515 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 CCT8L2Q96SF2 557 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 MTERF1Q99551 399 aaKnown RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 CCT7Q99832 543 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SARGQ9BW04 601 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ACPTQ9BZG2 426 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 RHBGQ9H310 441 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 WDR55Q9H6Y2 383 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-228ENST00000641847 RUBCNLQ9H714 662 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 MEAF6Q9HAF1 191 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 FAM60AQ9NP50 221 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 PDE7BQ9NP56 450 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 PFDN4Q9NQP4 134 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 PSD3Q9NYI0 1048 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 SEMA5BQ9P283 1151 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ADGRE2Q9UHX3 823 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 ZFP69BQ9UJL9 534 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 PILRAQ9UKJ1 303 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TSC22D4Q9Y3Q8 395 aa8.94□□□□□ -0.98
PHGDH-228ENST00000641847 TACC2O95359 2948 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ATP6AP2A0A1C7CYW4 349 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 MAGEB17A8MXT2 336 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 B4E171 279 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 FOXE1O00358 373 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-228ENST00000641847 NDUFAB1O14561 156 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 RGS14O43566 566 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SNX3O60493 162 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SH3BGRLO75368 114 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 CLEC3AO75596 197 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ATP6AP2O75787 350 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 ETHE1O95571 254 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 SLC35G6P0C7Q6 338 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 HSD3B1P14060 373 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 HSD3B2P26439 372 aa8.93□□□□□ -0.98
PHGDH-228ENST00000641847 EPHA3P29320 983 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms