RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	PADI2	Q9Y2J8	665 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ALG5	Q9Y673	324 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	DOCK3	Q8IZD9	2030 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	IGLV3-10	A0A075B6K4	115 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PRR23A	A6NEV1	266 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF670-ZNF695	F2Z2N8	137 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PDPK1	O15530	556 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CCNB2	O95067	398 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CPSF4	O95639	269 aa	Known RBP	13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CYP17A1	P05093	508 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SDC1	P18827	310 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MAPK1	P28482	360 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	GK	P32189	559 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SOX3	P41225	446 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MAPK12	P53778	367 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	VEZF1	Q14119	521 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PTCHD3	Q3KNS1	767 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	FAM217A	Q8IXS0	508 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LGI4	Q8N135	537 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CPA6	Q8N4T0	437 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SELENOM	Q8WWX9	145 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MARVELD3	Q96A59	401 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TOE1	Q96GM8	510 aa	Known RBP	13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HDHD5	Q9BXW7	423 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TLR8	Q9NR97	1041 aa	Known RBP	13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CLN6	Q9NWW5	311 aa		13.14	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SH3D21	A4FU49	640 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SEC14L5	O43304	696 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PDYN	P01213	254 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF250	P15622	560 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF30	P17039	623 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RGS4	P49798	205 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PCDH1	Q08174	1060 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LCN1P1	Q5VSP4	162 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	STK40	Q8N2I9	435 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	GLTP	Q9NZD2	209 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC6A14	Q9UN76	642 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TSPAN4	O14817	238 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PLA2G10	O15496	165 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PRL	P01236	227 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PDGFA	P04085	211 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PSMA3	P25788	255 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	AQP1	P29972	269 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PBLD	P30039	288 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	GPC1	P35052	558 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC11A2	P49281	568 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	YBEY	P58557	167 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SPIB	Q01892	262 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MXD1	Q05195	221 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SOCS4	Q8WXH5	440 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	STUB1	Q9UNE7	303 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	BRWD3	Q6RI45	1802 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TNFRSF10B	O14763	440 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SOX9	P48436	509 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RHAG	Q02094	409 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ARHGEF7	Q14155	803 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LAMTOR1	Q6IAA8	161 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SYNPO	Q8N3V7	929 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TM9SF2	Q99805	663 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	DOHH	Q9BU89	302 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	P2RY12	Q9H244	342 aa		13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.13	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CLDN9	O95484	217 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PTX3	P26022	381 aa	Predicted RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CRYBB2	P43320	205 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MAP2K3	P46734	347 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CDH12	P55289	794 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ALG1L	Q6GMV1	187 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PTCHD4	Q6ZW05	846 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MGME1	Q9BQP7	344 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MIXL1	Q9H2W2	232 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NDUFAF4	Q9P032	175 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CRLS1	Q9UJA2	301 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SSR3	Q9UNL2	185 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514		A0A1W2PQL4	384 aa	Predicted RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC9A3R1	O14745	358 aa	Predicted RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CDRT1	O95170	752 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CFL1	P23528	166 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CHM	P24386	653 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CSTF2	P33240	577 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	EXOC3L2	Q2M3D2	409 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	FAM151B	Q6UXP7	276 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PCSK9	Q8NBP7	692 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TRMT61A	Q96FX7	289 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PKMYT1	Q99640	499 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SMLR1	H3BR10	107 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CKMT1A	P12532	417 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ALDH6A1	Q02252	535 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MRPL28	Q13084	256 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MICA	Q29983	383 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF697	Q5TEC3	545 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TSEN54	Q7Z6J9	526 aa	Known RBP	13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TMC8	Q8IU68	726 aa		13.12	□□□□□ -0.31
KCNMA1-238	ENST00000638514	OR8H1	Q8NGG4	311 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms