RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	FABP12	A6NFH5	140 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	OR6C65	A6NJZ3	312 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	MPTX1	A8MV57	137 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	SMLR1	H3BR10	107 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PPP6C	O00743	305 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	FABP7	O15540	132 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	SLC7A4	O43246	635 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PRAMEF11	O60813	436 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PQBP1	O60828	265 aa	Known RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	APOL3	O95236	402 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	LATS1	O95835	1130 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	OR56A5	P0C7T3	313 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	C4BPB	P20851	252 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	AZGP1	P25311	298 aa	Known RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	DNAJA1	P31689	397 aa	Known RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GPC1	P35052	558 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	SLC19A1	P41440	591 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PXN	P49023	591 aa	Predicted RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PGF	P49763	221 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CDH4	P55283	916 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	HOXC5	Q00444	222 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CREM	Q03060	361 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	DUSP4	Q13115	394 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	PRKG2	Q13237	762 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	SEMA3A	Q14563	771 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF460	Q14592	562 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.36	□□□□□ -0.75	2e-7	■■■□□ 14.6
CHD2-223	ENST00000636306		Q3ZCU0	254 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GPR33	Q49SQ1	333 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	HECTD3	Q5T447	861 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CNKSR3	Q6P9H4	555 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	METAP1D	Q6UB28	335 aa	Predicted RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	USP45	Q70EL2	814 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GPR155	Q7Z3F1	870 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	ANKRD33	Q7Z3H0	272 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GALNT5	Q7Z7M9	940 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	RNF135	Q8IUD6	432 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CCDC36	Q8IYA8	594 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	TTC9B	Q8N6N2	239 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	C19orf18	Q8NEA5	215 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	ST8SIA2	Q92186	375 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CREB3L1	Q96BA8	519 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GHITM	Q9H3K2	345 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	CATSPERZ	Q9NTU4	200 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	GPRC5B	Q9NZH0	403 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	UXT	Q9UBK9	157 aa	Predicted RBP	10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	OGDHL	Q9ULD0	1010 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306	COMMD10	Q9Y6G5	202 aa		10.36	□□□□□ -0.75
CHD2-223	ENST00000636306		C9JVG2	144 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	PCDH17	O14917	1159 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SSX5	O60225	188 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	EFCAB14	O75071	495 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	CLDN11	O75508	207 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	PEX11B	O96011	259 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	EPO	P01588	193 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	HMBS	P08397	361 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SRC	P12931	536 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SOX11	P35716	441 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	HSD17B2	P37059	387 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	CD86	P42081	329 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	EPHA5	P54756	1037 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	UFM1	P61960	85 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SH3BP2	P78314	561 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SF3A2	Q15428	464 aa	Known RBP	10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SOWAHC	Q53LP3	525 aa	Predicted RBP	10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	C10orf62	Q5T681	223 aa	Predicted RBP	10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	CHST9	Q7L1S5	443 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	DET1	Q7L5Y6	550 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	ATCAY	Q86WG3	371 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	ZSWIM9	Q86XI8	627 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	ZZZ3	Q8IYH5	903 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	ENTHD1	Q8IYW4	607 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SPATA6L	Q8N4H0	392 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	CAMKK1	Q8N5S9	505 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	HGD	Q93099	445 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	PYURF	Q96I23	114 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	HRASLS5	Q96KN8	279 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	EXOC2	Q96KP1	924 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	TOX2	Q96NM4	488 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	FAM129B	Q96TA1	746 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SEC22C	Q9BRL7	303 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	DPCD	Q9BVM2	203 aa	Predicted RBP	10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	PIF1	Q9H611	641 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	MID1IP1	Q9NPA3	183 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	SDHAF2	Q9NX18	166 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	AASS	Q9UDR5	926 aa		10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	ZFR2	Q9UPR6	939 aa	Known RBP	10.35	□□□□□ -0.75
CHD2-223	ENST00000636306	TRAV6	A0A075B6T7	132 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	FAM240B	A0A1B0GVZ2	78 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306		A8MXK9	166 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	FAM220BP	B1ANY3	271 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	INMT-MINDY4	F8WBC2	141 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PCDHGA12	O60330	932 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	OR4F21	O95013	312 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	C9	P02748	559 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	H2AFB1	P0C5Y9	115 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	H2AFB2	P0C5Z0	115 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CKMT1A	P12532	417 aa		10.34	□□□□□ -0.75

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