RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OAZ2O95190 189 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF19P17023 458 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 TBPL1P62380 186 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 DEFB103AP81534 67 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PON3Q15166 354 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 NCEH1Q6PIU2 408 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 UMODL1-AS1Q8N2C9 162 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 JAGN1Q8N5M9 183 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 MRGPRX2Q96LB1 330 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 IL4I1Q96RQ9 567 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 SNTG1Q9NSN8 517 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF639Q9UID6 485 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 SCML1Q9UN30 329 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 WASF3Q9UPY6 502 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ARFGEF2Q9Y6D5 1785 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 DOT1LQ8TEK3 1739 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 TEX46H3BTG2 121 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PRKD3O94806 890 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 CREB1P16220 341 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 HOXD13P35453 343 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 CEBPGP53567 150 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 SPIN3Q5JUX0 258 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 UBQLNLQ8IYU4 475 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 MFSD2AQ8NA29 543 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 TMEM40Q8WWA1 233 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 NR4A3Q92570 626 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 HTRA1Q92743 480 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 NXPE2Q96DL1 559 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 HSH2DQ96JZ2 352 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZFP3Q96NJ6 502 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 DPH7Q9BTV6 452 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 XYLT2Q9H1B5 865 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 MALT1Q9UDY8 824 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 STOML2Q9UJZ1 356 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ACOT7O00154 380 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 HBQ1P09105 142 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 RNH1P13489 461 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 CD9P21926 228 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 AZGP1P25311 298 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PEX2P28328 305 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 NNATQ16517 81 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 LYSMD4Q5XG99 296 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF761Q86XN6 746 aaPredicted RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 OR52B2Q96RD2 323 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 POLDIP3Q9BY77 421 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
CLIP1-219ENST00000620786 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 TEX264Q9Y6I9 313 aa10.97□□□□□ -0.65
CLIP1-219ENST00000620786 P04436 131 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TPRG1LQ5T0D9 272 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 LRIF1Q5T3J3 769 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 LRRC69Q6ZNQ3 347 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 RAB8BQ92930 207 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 SLCO2A1Q92959 643 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 CPEB1Q9BZB8 566 aaKnown RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 AHCYL1O43865 530 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 HNRNPA2B1P22626 353 aaKnown RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TM4SF4P48230 202 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 GPX6P59796 221 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 EMX2Q04743 252 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 ZMYND11Q15326 602 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 MSS51Q4VC12 460 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 MRPL10Q7Z7H8 261 aaKnown RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TMEM17Q86X19 198 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF548Q8NEK5 533 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 NUP43Q8NFH3 380 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 OR4K1Q8NGD4 311 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TOP1MTQ969P6 601 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TTYH2Q9BSA4 534 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 HCFC1R1Q9NWW0 138 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 NLGN3Q9NZ94 848 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 PDYNP01213 254 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 IL3P08700 152 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 HK1P19367 917 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 PAX7P23759 505 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 SLC3A1Q07837 685 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 PUDPQ08623 228 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 TMPPEQ6ZT21 453 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 OR5L2Q8NGL0 311 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 FIBINQ8TAL6 211 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 GNPDA2Q8TDQ7 276 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 HLA-CQ95604 372 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 ZNF689Q96CS4 500 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 PELOQ9BRX2 385 aaKnown RBP10.96□□□□□ -0.65
CLIP1-219ENST00000620786 ZDHHC18Q9NUE0 388 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 POMPQ9Y244 141 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 IFT52Q9Y366 437 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 PCDHGB2Q9Y5G2 931 aa10.96□□□□□ -0.65
CLIP1-219ENST00000620786 HTR3EA5X5Y0 456 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 KLHL33A6NCF5 533 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF487B1APH4 448 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 CPNE6O95741 557 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 PXNP49023 591 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-219ENST00000620786 SGCAQ16586 387 aa10.96□□□□□ -0.66
CLIP1-219ENST00000620786 OCLNQ16625 522 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms