RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 TSPAN11A1L157 253 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 OPN1SWP03999 348 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 CRATP43155 626 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 PPP5CP53041 499 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 TUBA1BP68363 451 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 DNASE1L3Q13609 305 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 TUBA1AQ71U36 451 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 NXPE3Q969Y0 559 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 DACH2Q96NX9 599 aa28.8■■■□□ 2.2
KHSRP-213ENST00000619396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP28.8■■■□□ 2.28e-8■■■□□ 16.5
KHSRP-213ENST00000619396 RANBP2P49792 3224 aaKnown RBP28.8■■■□□ 2.2
KHSRP-213ENST00000619396 CLCA1A8K7I4 914 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 CDK1P06493 297 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 LIPIQ6XZB0 460 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 DPPA4Q7L190 304 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 OR4K1Q8NGD4 311 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 MCFD2Q8NI22 146 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 MYDGFQ969H8 173 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 REEP4Q9H6H4 257 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 AIREO43918 545 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 GABRB1P18505 474 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 PBLDP30039 288 aaPredicted RBP28.79■■■□□ 2.2
KHSRP-213ENST00000619396 PRLHRP49683 370 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 CASP9P55211 416 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 MED27Q6P2C8 311 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 ZNF557Q8N988 423 aaPredicted RBP28.79■■■□□ 2.2
KHSRP-213ENST00000619396 CCM2Q9BSQ5 444 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 ZBTB20Q9HC78 741 aaPredicted RBP28.79■■■□□ 2.2
KHSRP-213ENST00000619396 AMBNQ9NP70 447 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 ZNF226Q9NYT6 803 aa28.79■■■□□ 2.2
KHSRP-213ENST00000619396 TCF20Q9UGU0 1960 aaKnown RBP28.78■■■□□ 2.2
KHSRP-213ENST00000619396 PLK4O00444 970 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 KPNA3O00505 521 aaPredicted RBP28.78■■■□□ 2.2
KHSRP-213ENST00000619396 ATG13O75143 517 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 ELFN1P0C7U0 828 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 ADH5P11766 374 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 ANXA8P13928 327 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 PDHA2P29803 388 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 MMP12P39900 470 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 MAGEA8P43361 318 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 CLK1P49759 484 aaKnown RBP28.78■■■□□ 2.2
KHSRP-213ENST00000619396 IFI44LQ53G44 452 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 SFTPA1Q8IWL2 248 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 SPASTQ9UBP0 616 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 LRRK1Q38SD2 2015 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 REV3LO60673 3130 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 CD40LGP29965 261 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 EIF2DP41214 584 aaKnown RBP28.78■■■□□ 2.2
KHSRP-213ENST00000619396 OR1E2P47887 323 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 SLC6A11P48066 632 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 TIGD6Q17RP2 521 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 ZNF284Q2VY69 593 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 OR52N2Q8NGI0 321 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 MMP27Q9H306 513 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 KCNE2Q9Y6J6 123 aa28.78■■■□□ 2.2
KHSRP-213ENST00000619396 OTOL1A6NHN0 477 aaPredicted RBP28.77■■■□□ 2.2
KHSRP-213ENST00000619396 METTL15A6NJ78 407 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 PRRT4C9JH25 899 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 GADD45AP24522 165 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 ELOAQ14241 798 aaKnown RBP28.77■■■□□ 2.2
KHSRP-213ENST00000619396 MICAQ29983 383 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 SLC46A3Q7Z3Q1 461 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 GLYATL1Q969I3 302 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 AP2M1Q96CW1 435 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 VPS35Q96QK1 796 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 NIPSNAP1Q9BPW8 284 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 C1GALT1Q9NS00 363 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 THSD1Q9NS62 852 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 RAD18Q9NS91 495 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 POFUT2Q9Y2G5 429 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 UNC80Q8N2C7 3258 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 PTX3P26022 381 aaPredicted RBP28.77■■■□□ 2.2
KHSRP-213ENST00000619396 CTSKP43235 329 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 EEF1A2Q05639 463 aaKnown RBP28.77■■■□□ 2.2
KHSRP-213ENST00000619396 RBBP4Q09028 425 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 GCNT6Q5T4J0 391 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 CCDC80Q76M96 950 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 ARMCX6Q7L4S7 300 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 OR52J3Q8NH60 311 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 OTUB2Q96DC9 234 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 SLC35A5Q9BS91 424 aa28.77■■■□□ 2.2
KHSRP-213ENST00000619396 ANTXRLA6NF34 631 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 SPINT1O43278 529 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 AQP9O43315 295 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 C6orf47O95873 294 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 TEKQ02763 1124 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 ZNF763Q0D2J5 394 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 SCARB2Q14108 478 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 MPEG1Q2M385 716 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 EXOC3L2Q2M3D2 409 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 ZNF404Q494X3 552 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 ANGPTL8Q6UXH0 198 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 TMPRSS11BQ86T26 416 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 ZNF480Q8WV37 535 aa28.76■■■□□ 2.19
KHSRP-213ENST00000619396 KLHL18O94889 574 aa28.75■■■□□ 2.19
KHSRP-213ENST00000619396 HNRNPA1P09651 372 aaKnown RBP eCLIP28.75■■■□□ 2.19
KHSRP-213ENST00000619396 PNLIPRP1P54315 467 aa28.75■■■□□ 2.19
KHSRP-213ENST00000619396 CDH12P55289 794 aa28.75■■■□□ 2.19
KHSRP-213ENST00000619396 SPIBQ01892 262 aa28.75■■■□□ 2.19
KHSRP-213ENST00000619396 TMEM115Q12893 351 aaPredicted RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms