RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 LRIT1Q9P2V4 623 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 CNOT6Q9ULM6 557 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 KLF11O14901 512 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR5F1O95221 314 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PENKP01210 267 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GKP32189 559 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 RAB14P61106 215 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF678Q5SXM1 525 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LHX8Q68G74 356 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 C3P1Q6ZMU1 363 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 KCTD8Q6ZWB6 473 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PARS2Q7L3T8 475 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPAT4Q86UL3 456 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SMAD5Q99717 465 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 NPAS2Q99743 824 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 CRB3Q9BUF7 120 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 HAPLN2Q9GZV7 340 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 RPF2Q9H7B2 306 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 DNAJB9Q9UBS3 223 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRSS51A0A1B0GVH4 220 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 H7BY64 318 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PGRMC2O15173 223 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 DLGAP3O95886 979 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 MNDAP41218 407 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC25A3Q00325 362 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SMCO1Q147U7 214 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ENPP6Q6UWR7 440 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LINC01465Q8N7H1 131 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PROKR2Q8NFJ6 384 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 TCEAL4Q96EI5 215 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF578Q96N58 590 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRAP1Q96NZ9 151 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GPN2Q9H9Y4 310 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 BTBD3Q9Y2F9 522 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 RPL36Q9Y3U8 105 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PHYHO14832 338 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 F3P13726 295 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 CHN2P52757 468 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 AP3S2P59780 193 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 MALLQ13021 153 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLAMF1Q13291 335 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF460Q14592 562 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LPAL2Q16609 132 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LIX1LQ8IVB5 337 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR5T3Q8NGG3 340 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 PPM1MQ96MI6 270 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 EMC3Q9P0I2 261 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 MCM8Q9UJA3 840 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LRCH1Q9Y2L9 728 aa9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 BAZ2BQ9UIF8 2168 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-204ENST00000615230 LY75O60449 1722 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 SDC3O75056 442 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 H1F0P07305 194 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CD1DP15813 335 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 HOXD9P28356 352 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ERFP50548 548 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PUM1Q14671 1186 aaKnown RBP eCLIP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 FAM180AQ6UWF9 173 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ARHGAP12Q8IWW6 846 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 FTMTQ8N4E7 242 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZADH2Q8N4Q0 377 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 METTL25Q8N6Q8 603 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 IPCEF1Q8WWN9 437 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TESCQ96BS2 214 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 RTP4Q96DX8 246 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ASB16Q96NS5 453 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TRNT1Q96Q11 434 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 MAPKAP1Q9BPZ7 522 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 DSN1Q9H410 356 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PRSS16Q9NQE7 514 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TAAR2Q9P1P5 351 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ZNF451Q9Y4E5 1061 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR1A2Q9Y585 309 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CLIC1O00299 241 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 HCN1O60741 890 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 EGFP01133 1207 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 DBIP07108 87 aaKnown RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 SLC6A11P48066 632 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CDKN1CP49918 316 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 NSDHLQ15738 373 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 ACSBG2Q5FVE4 666 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 TNFAIP8L2Q6P589 184 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 FRMD7Q6ZUT3 714 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 MFSD2AQ8NA29 543 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CHST14Q8NCH0 376 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CCDC54Q8NEL0 328 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 OR14A16Q8NHC5 309 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 SCAMP4Q969E2 229 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 SEMA6AQ9H2E6 1030 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 EPHX3Q9H6B9 360 aa9.36□□□□□ -0.91
TNFRSF9-204ENST00000615230 CPNE7Q9UBL6 633 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms