RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 TAGAPQ8N103 731 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 HPS1Q92902 700 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 C11orf16Q9NQ32 467 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 ASF1AQ9Y294 204 aa13.19□□□□□ -0.3
CTCFL-213ENST00000607923 CAB39Q9Y376 341 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-213ENST00000607923 PRMT3O60678 531 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 LILRB3O75022 631 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 TGFBR2P37173 567 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CD97P48960 835 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CDK6Q00534 326 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 MADCAM1Q13477 382 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 SPIN4Q56A73 249 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 OR6Q1Q8NGQ2 317 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 MRGPRX3Q96LB0 322 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 Q96MT0 163 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CEP44Q9C0F1 390 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CTPS2Q9NRF8 586 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 MS4A12Q9NXJ0 267 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF282Q9UDV7 671 aaPredicted RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 FAM32AQ9Y421 112 aaKnown RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 A0A1W2PRB8 838 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 FEZF1A0PJY2 475 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 ANKDD1BA6NHY2 528 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 WASHC1A8K0Z3 465 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 M0R082 166 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 TLL1O43897 1013 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 PTHP01270 115 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 PRLHRP49683 370 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 ST3GAL4Q11206 333 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 HSPB3Q12988 150 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 DUSP7Q16829 419 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 INAVAQ3KP66 663 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 ERAP2Q6P179 960 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 TTC23LQ6PF05 361 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 WASH2PQ6VEQ5 465 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 OR56A3Q8NH54 315 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 FAM129BQ96TA1 746 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 CHST8Q9H2A9 424 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF556Q9HAH1 456 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 HELZP42694 1942 aaKnown RBP13.18□□□□□ -0.3
CTCFL-213ENST00000607923 NOTCH4Q99466 2003 aa13.18□□□□□ -0.3
CTCFL-213ENST00000607923 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 PCGF2P35227 344 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 MVDP53602 400 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 HIST2H2ACQ16777 129 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 BCDIN3DQ7Z5W3 292 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 MFSD4AQ8N468 514 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 AQP11Q8NBQ7 271 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 OR5AR1Q8NGP9 310 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 UCN3Q969E3 161 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 C11orf24Q96F05 449 aaPredicted RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 FCRL1Q96LA6 429 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 DSN1Q9H410 356 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 DMRT3Q9NQL9 472 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 NECTIN3Q9NQS3 549 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 TM7SF3Q9NS93 570 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 BTNL2Q9UIR0 455 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 SNX11Q9Y5W9 270 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF106Q9H2Y7 1883 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 TRBC2A0A5B9 178 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 A8MU76 341 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 KDM1AO60341 852 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 UGDHO60701 494 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 SERPINB7O75635 380 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 AP2A2O94973 939 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 BCHEP06276 602 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 PSMB5P28074 263 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 VIPR2P41587 438 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 ST8SIA6P61647 398 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 HIST2H2AA3Q6FI13 130 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 LILRA6Q6PI73 481 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 GPR155Q7Z3F1 870 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 FAM20CQ8IXL6 584 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 CADM3Q8N126 398 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 ZNF675Q8TD23 568 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 LRRC3BQ96PB8 259 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 SLIRPQ9GZT3 109 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 EXOSC4Q9NPD3 245 aaKnown RBP13.17□□□□□ -0.3
CTCFL-213ENST00000607923 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
CTCFL-213ENST00000607923 LATO43561 262 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms