RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 POU4F2Q12837 409 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 OR2F1Q13607 317 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ENPP7Q6UWV6 458 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 TMCO2Q7Z6W1 182 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 SCN4BQ8IWT1 228 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ZNF433Q8N7K0 673 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 FAM86B1Q8N7N1 296 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 P2RY11Q96G91 374 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 NOL4LQ96MY1 436 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 FAM49AQ9H0Q0 323 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 ATG5Q9H1Y0 275 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 EMC7Q9NPA0 242 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ATP13A2Q9NQ11 1180 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CXCL11O14625 94 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 EGFP01133 1207 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 MBP02144 154 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ITGA3P26006 1051 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 MGAT1P26572 445 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SF1Q15637 639 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 CES5AQ6NT32 575 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ZNF704Q6ZNC4 412 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 TMEM104Q8NE00 496 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RAB3CQ96E17 227 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CCDC120Q96HB5 630 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.28□□□□□ -1.88
NEB-218ENST00000603639 ZNF541Q9H0D2 1346 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CD63P08962 238 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ANXA4P09525 319 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 TXNP10599 105 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 BPIP17213 487 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SRMP19623 302 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RPA4Q13156 261 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RAB39BQ96DA2 213 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 KLHL15Q96M94 604 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 TRIB3Q96RU7 358 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 IDI2Q9BXS1 227 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 COMMD4Q9H0A8 199 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 NXF3Q9H4D5 531 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 PTGES2Q9H7Z7 377 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 GLOD4Q9HC38 313 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 DCP1AQ9NPI6 582 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 CNOT2Q9NZN8 540 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 PIK3C2AO00443 1686 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 BCKDHAP12694 445 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 IFNGR1P15260 489 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CDH12P55289 794 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 PAFAH1B2P68402 229 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 MTAPQ13126 283 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 COL13A1Q5TAT6 717 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 ARL9Q6T311 187 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 NIF3L1Q9GZT8 377 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SLC7A11Q9UPY5 501 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CACNB4O00305 520 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 SCN2BO60939 215 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 P2RX3P56373 397 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 FGFBP1Q14512 234 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 VAMP3Q15836 100 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 MFSD14BQ5SR56 506 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 REEP3Q6NUK4 255 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SERPINA12Q8IW75 414 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 OR10Z1Q8NGY1 313 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 DUSP19Q8WTR2 217 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RBPMSQ93062 196 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 SLC46A1Q96NT5 459 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 FERD3LQ96RJ6 166 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SAP130Q9H0E3 1048 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 INPP5EQ9NRR6 644 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ALKQ9UM73 1620 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 GLYATL1P3A0A0U1RQE8 302 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 C2orf78A6NCI8 922 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 A8MVJ9 347 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 LOC730098B7Z3J9 87 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 DDX39AO00148 427 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 PTBP3O95758 552 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 PRKAG1P54619 331 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 HTD2P86397 168 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 TNFRSF17Q02223 184 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ABHD18Q0P651 414 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ELAVL2Q12926 359 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 SPP2Q13103 211 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 TMEM86AQ8N2M4 240 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 MYRFLQ96LU7 910 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RAB9BQ9NP90 201 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 PXDNQ92626 1479 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 RNF212BA8MTL3 300 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 TBX1O43435 398 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 KIR3DL1P43629 444 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 IL13RA1P78552 427 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 LASP1Q14847 261 aaKnown RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 RSU1Q15404 277 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 FAM205AQ6ZU69 1335 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 SGPP2Q8IWX5 399 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 FCRL5Q96RD9 977 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 CD244Q9BZW8 370 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 GHRLQ9UBU3 117 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 ZNF230Q9UIE0 474 aaPredicted RBP3.28□□□□□ -1.88
NEB-218ENST00000603639 A0A0J9YVX5 310 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 FZD7O75084 574 aa3.28□□□□□ -1.88
NEB-218ENST00000603639 OR2T7P0C7T2 308 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms