RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 SDK1Q7Z5N4 2213 aa11.2□□□□□ -0.62
VRK3-223ENST00000601341 THADAQ6YHU6 1953 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 ELOVL7A1L3X0 281 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 FAM149AA5PLN7 773 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 FAM220BPB1ANY3 271 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 B4DGG1 531 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 H0YIV9 168 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 UPK1AO00322 258 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 PLOD2O00469 737 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 TPST1O60507 370 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 PRMT3O60678 531 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 ALBP02768 609 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 ALPLP05186 524 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 GNAO1P09471 354 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 NCK1P16333 377 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 CD22P20273 847 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 RXRGP48443 463 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 HLCSP50747 726 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 ARSFP54793 590 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 RPL38P63173 70 aaKnown RBP11.19□□□□□ -0.62
VRK3-223ENST00000601341 HHEXQ03014 270 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 PRDX1Q06830 199 aaKnown RBP11.19□□□□□ -0.62
VRK3-223ENST00000601341 DAG1Q14118 895 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 GPR18Q14330 331 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 HIST2H2ACQ16777 129 aaPredicted RBP11.19□□□□□ -0.62
VRK3-223ENST00000601341 RUNDC3AQ59EK9 446 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 CATSPEREQ5SY80 951 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 PEAR1Q5VY43 1037 aaPredicted RBP11.19□□□□□ -0.62
VRK3-223ENST00000601341 TTC23Q5W5X9 447 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 HIST2H2AA3Q6FI13 130 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 ZDHHC13Q8IUH4 622 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 FAM110BQ8TC76 370 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 LZICQ8WZA0 190 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 SLC22A18Q96BI1 424 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 SDCCAG3Q96C92 435 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 REPS1Q96D71 796 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 NTN4Q9HB63 628 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 VAPAQ9P0L0 249 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 CSNK1G3Q9Y6M4 447 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
VRK3-223ENST00000601341 A0A096LPI6 279 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 FAM221BA6H8Z2 402 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 TRIM64BA6NI03 449 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 PRICKLE3O43900 615 aaPredicted RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 SDC3O75056 442 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CCNDBP1O95273 360 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CHRM5P08912 532 aaPredicted RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 JUNBP17275 347 aaPredicted RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 RPS6KA3P51812 740 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 ABATP80404 500 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 BIRC2Q13490 618 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 DUOXA1Q1HG43 343 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 DEFB133Q30KQ1 61 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 RFX4Q33E94 735 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 FAM174BQ3ZCQ3 159 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 SGO1Q5FBB7 561 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 C10orf62Q5T681 223 aaPredicted RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 MED27Q6P2C8 311 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CALHM3Q86XJ0 350 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 EID3Q8N140 333 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 ABHD11Q8NFV4 315 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 OR2A1Q8NGT9 310 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CEP76Q8TAP6 659 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 UBE2E3Q969T4 207 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CMTM7Q96FZ5 175 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 PELI2Q9HAT8 420 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 FARSBQ9NSD9 589 aaKnown RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 MAPRE3Q9UPY8 281 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 SH2B3Q9UQQ2 575 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 AP1M2Q9Y6Q5 423 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 MYOCOSA0A1B0GUC4 107 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 SEC22BO75396 215 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 DNAJB5O75953 348 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CPNE6O95741 557 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 PDYNP01213 254 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 BCKDHAP12694 445 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CXCR2P25025 360 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 DCKP27707 260 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 PSMB5P28074 263 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 FASLGP48023 281 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CCR8P51685 355 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 C21orf58P58505 322 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 MTPNP58546 118 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 BNC1Q01954 994 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 TUBA3CQ13748 450 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 SLBPQ14493 270 aaKnown RBP eCLIP11.18□□□□□ -0.62
VRK3-223ENST00000601341 SF1Q15637 639 aaKnown RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 ZC3H12BQ5HYM0 836 aaKnown RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 RBM48Q5RL73 367 aaKnown RBP11.18□□□□□ -0.62
VRK3-223ENST00000601341 OGFOD3Q6PK18 319 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 TMEM26Q6ZUK4 368 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 SFTPA2Q8IWL1 248 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 ADGRF3Q8IZF5 1079 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 KRT78Q8N1N4 520 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 TMEM132CQ8N3T6 1108 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 LIX1Q8N485 282 aa11.18□□□□□ -0.62
VRK3-223ENST00000601341 OR7G3Q8NG95 312 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms