RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MROH9Q5TGP6 573 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 TBC1D1Q86TI0 1168 aaPredicted RBP14.14□□□□□ -0.15
LIG1-215ENST00000597901 BEST3Q8N1M1 668 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 MMGT1Q8N4V1 131 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 ELP5Q8TE02 316 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 EXT2Q93063 718 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 GAL3ST3Q96A11 431 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
LIG1-215ENST00000597901 QRFPRQ96P65 431 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 ATOH8Q96SQ7 321 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 SLX1AQ9BQ83 275 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 CDCP1Q9H5V8 836 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 OSGIN2Q9Y236 505 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 ASB1Q9Y576 335 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 SCN3AQ9NY46 2000 aa14.14□□□□□ -0.15
LIG1-215ENST00000597901 NUP210LQ5VU65 1888 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 IGKV3D-11A0A0A0MRZ8 115 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 HMX2A2RU54 273 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 A8MUA0 341 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 MAN1A2O60476 641 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 RASAL1O95294 804 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 C2P06681 752 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 CD22P20273 847 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 CASP2P42575 452 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ST13P50502 369 aaKnown RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 PLA2G16P53816 162 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 CHIT1Q13231 466 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 TUBA3CQ13748 450 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ESPL1Q14674 2120 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 TBCCQ15814 346 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 INAQ16352 499 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 HIST2H2ACQ16777 129 aaPredicted RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 ADPRMQ3LIE5 342 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 HIST2H2AA3Q6FI13 130 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ADNP2Q6IQ32 1131 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ABHD17CQ6PCB6 329 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 TUBA3EQ6PEY2 450 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 RPS19BP1Q86WX3 136 aaKnown RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 SLC5A8Q8N695 610 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ARMC2Q8NEN0 867 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 NFAM1Q8NET5 270 aaPredicted RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 OR2L5Q8NG80 312 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 DNAJB8Q8NHS0 232 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 ZNF592Q92610 1267 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 C5orf34Q96MH7 638 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 F2RL3Q96RI0 385 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 EFCAB11Q9BUY7 163 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 REXO4Q9GZR2 422 aaKnown RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 NUDT4Q9NZJ9 180 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 DMGDHQ9UI17 866 aaKnown RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 DOPEY2Q9Y3R5 2298 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 COL12A1Q99715 3063 aa14.13□□□□□ -0.15
LIG1-215ENST00000597901 RP1L1Q8IWN7 2480 aaPredicted RBP14.13□□□□□ -0.15
LIG1-215ENST00000597901 A0A087X1B8 175 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 UBXN8O00124 270 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 LRRTM2O43300 516 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 B3GALT2O43825 422 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 KERAO60938 352 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 LDLRP01130 860 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 HPDP32754 393 aaPredicted RBP14.12□□□□□ -0.15
LIG1-215ENST00000597901 TAS2R50P59544 299 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 SRSF11Q05519 484 aaKnown RBP14.12□□□□□ -0.15
LIG1-215ENST00000597901 PCDH1Q08174 1060 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 BMPR2Q13873 1038 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 ZNF766Q5HY98 468 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 PAGE2BQ5JRK9 111 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 SPINK14Q6IE38 97 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 LRRC70Q7Z2Q7 622 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 RELL1Q8IUW5 271 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 KIF2BQ8N4N8 673 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 KCTD4Q8WVF5 259 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 NR4A3Q92570 626 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 SIGLEC12Q96PQ1 595 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 SERINC2Q96SA4 455 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 PRDM7Q9NQW5 492 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 ANKRD10Q9NXR5 420 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 NINJ2Q9NZG7 142 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 ABI3Q9P2A4 366 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 MMACHCQ9Y4U1 282 aa14.12□□□□□ -0.15
LIG1-215ENST00000597901 A0A088AWK7 358 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 SUPT3HB4E1H0 165 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 K7EPI3 171 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 CLDN4O14493 209 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 SUPT3HO75486 399 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 CRYABP02511 175 aaKnown RBP14.11□□□□□ -0.15
LIG1-215ENST00000597901 MTHFD2P13995 350 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 ZNF10P21506 573 aaPredicted RBP14.11□□□□□ -0.15
LIG1-215ENST00000597901 MST1P26927 711 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 PHBP35232 272 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 TDGF1P3P51864 188 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 MTTPP55157 894 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 HSD17B7P56937 341 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 RAB38P57729 211 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 IRF9Q00978 393 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 PTPN13Q12923 2485 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 E2F2Q14209 437 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 OR1C1Q15619 314 aa14.11□□□□□ -0.15
LIG1-215ENST00000597901 UAP1Q16222 522 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms