RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 SSU72Q9NP77 194 aaKnown RBP20.28■□□□□ 0.84
RETREG3-204ENST00000586796 FARSBQ9NSD9 589 aaKnown RBP20.28■□□□□ 0.84
RETREG3-204ENST00000586796 C14orf105Q9NVL8 296 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 MKL2Q9ULH7 1088 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 SNX6Q9UNH7 406 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 MAN2B2Q9Y2E5 1009 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 STK38LQ9Y2H1 464 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 TSC22D4Q9Y3Q8 395 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 ACTL7BQ9Y614 415 aa20.28■□□□□ 0.84
RETREG3-204ENST00000586796 CFAP47Q6ZTR5 3102 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 A0A088AWK7 358 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 WDR91A4D1P6 747 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 OR2W5A6NFC9 320 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 UBFD1O14562 309 aaKnown RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 B3GALT2O43825 422 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 CDC123O75794 336 aaPredicted RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 ZNF10P21506 573 aaPredicted RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 PTX3P26022 381 aaPredicted RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 CERS1P27544 350 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 HMOX2P30519 316 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 EMP2P54851 167 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 PKNOX1P55347 436 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 ASPHQ12797 758 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 ATP1A4Q13733 1029 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 TCHHL1Q5QJ38 904 aaPredicted RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 DEPDC1Q5TB30 811 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 UBE3DQ7Z6J8 389 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 SRFBP1Q8NEF9 429 aaKnown RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 METTL6Q8TCB7 284 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 AGAP11Q8TF27 550 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 SELENOMQ8WWX9 145 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 QRFPRQ96P65 431 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 KCNC2Q96PR1 638 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 KCNA7Q96RP8 456 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 CENPKQ9BS16 269 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 SORBS1Q9BX66 1292 aaKnown RBP20.27■□□□□ 0.84
RETREG3-204ENST00000586796 TGIF2Q9GZN2 237 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 PRDM7Q9NQW5 492 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 TIMM22Q9Y584 194 aa20.27■□□□□ 0.84
RETREG3-204ENST00000586796 ARGFXA6NJG6 315 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 IDSB3KWA1 339 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 AGPSO00116 658 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 FOXE1O00358 373 aaPredicted RBP20.26■□□□□ 0.83
RETREG3-204ENST00000586796 CRCPO75575 148 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 ETHE1O95571 254 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 PDYNP01213 254 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 SSR2P43308 183 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 MTTPP55157 894 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 MAGOHP61326 146 aaKnown RBP20.26■□□□□ 0.83
RETREG3-204ENST00000586796 NAA20P61599 178 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 RUNX2Q13950 521 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 AP5B1Q2VPB7 878 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 BORAQ6PGQ7 559 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 ZCCHC23Q6ZST2 131 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 PPP1R32Q7Z5V6 425 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 CA13Q8N1Q1 262 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 ANKRD42Q8N9B4 389 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 THAP4Q8WY91 577 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 RGMAQ96B86 450 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 PKNOX2Q96KN3 472 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 SERINC2Q96SA4 455 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 HBEGFQ99075 208 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 SEMA3GQ9NS98 782 aa20.26■□□□□ 0.83
RETREG3-204ENST00000586796 SEC16AO15027 2179 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 FAM227AF5H4B4 570 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 PSMD12O00232 456 aaPredicted RBP20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MANBAO00462 879 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 PEX12O00623 359 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 B4GALT2O60909 372 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 ESRRBO95718 433 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 IGHEP01854 428 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 BPGMP07738 259 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MMP11P24347 488 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 ETV4P43268 484 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 RHDQ02161 417 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 CHAF1BQ13112 559 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MPP2Q14168 576 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MRGPREQ86SM8 312 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 SREK1Q8WXA9 508 aaKnown RBP20.25■□□□□ 0.83
RETREG3-204ENST00000586796 TBC1D20Q96BZ9 403 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 PAIP2Q9BPZ3 127 aaKnown RBP20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MESP1Q9BRJ9 268 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 ARHGAP9Q9BRR9 750 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 TBCDQ9BTW9 1192 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 MLXIPLQ9NP71 852 aa20.25■□□□□ 0.83
RETREG3-204ENST00000586796 CCDC88CQ9P219 2028 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 TM9SF1O15321 606 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 ZWINTO95229 277 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 KRT6AP02538 564 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 KRT6BP04259 564 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 ENO1P06733 434 aaKnown RBP20.24■□□□□ 0.83
RETREG3-204ENST00000586796 FHP07954 510 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 RNH1P13489 461 aaKnown RBP20.24■□□□□ 0.83
RETREG3-204ENST00000586796 ATP5A1P25705 553 aaKnown RBP20.24■□□□□ 0.83
RETREG3-204ENST00000586796 SERPINB4P48594 390 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 KRT6CP48668 564 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 FOXA1P55317 472 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 OR4C11Q6IEV9 310 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 SCIMPQ6UWF3 145 aa20.24■□□□□ 0.83
RETREG3-204ENST00000586796 ZNF793Q6ZN11 406 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms